Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4882 |
Symbol | |
ID | 8361058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6106312 |
End bp | 6106986 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644967032 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003124517 |
Protein GI | 256423864 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTT TGATAATAGA AGACGAACCG GCCCTTTCAA AGAGCATCGG CGCTTATCTG GCGGACGAAA ATTATCTCTG CGAATATGCG GGTAACTTCG GACAGGCCAT CGACAAGATC ACCGTATATG ATTATGATTG TATCCTGCTG GACCTGATGC TGCCCGGTGG CGACGGACTA AAAATACTGG AGGAAATCAA GGAACAGAAT AAACAGGATG GCGTCATTAT CATCTCTGCT AAAAACTCAC TGGACGATAA AATCAAAGGT CTGCAGATCG GTGCGGACGA CTATCTGACC AAACCCTTCC ACCTGCCTGA ACTGGCCGCC CGCATTTATT CTGTGATCAG ACGTAAACAA TTCGGAAACG TCAATATCAT CGAATTGAAT GAATTAAAGA TCAACCTGCT GGCAAAAACG GTTTCCGTTA ACGACAACAA CGTTGTACTG ACCAAAAAAG AATTTGACCT CCTCCTCTAC TTCATCAGCA ATAAGAACAA AGTCATTTCC AAAAGCGCGC TCGCAGAACA CCTTTCCGGT GATGTTGCCG ACATGTTCGA CAACTATGAC TTCATCTATG TACATATCAA AAACCTGAAA AAGAAACTGA CAGAAGCCGG TTGCGACAAC TACCTGAAAA CACTCTACGG CACAGGTTAT AAATGGGAAA TATGA
|
Protein sequence | MKILIIEDEP ALSKSIGAYL ADENYLCEYA GNFGQAIDKI TVYDYDCILL DLMLPGGDGL KILEEIKEQN KQDGVIIISA KNSLDDKIKG LQIGADDYLT KPFHLPELAA RIYSVIRRKQ FGNVNIIELN ELKINLLAKT VSVNDNNVVL TKKEFDLLLY FISNKNKVIS KSALAEHLSG DVADMFDNYD FIYVHIKNLK KKLTEAGCDN YLKTLYGTGY KWEI
|
| |