| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1504 |
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| Symbol | |
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| ID | 5538979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1920599 |
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| End bp | 1921294 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893642 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001431616 |
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| Protein GI | 156741487 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.263867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.57819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAC GCATTCTGGT GGTTGATGAT GATCGTCAGA TCACGCGGCT GGTCAGCGCC
TACCTGGAGC ACGCTGGATT TCAGACACTG ACTGCACACG ATGGCGCAAC TGCCCTCCGC
CTGGCACGCA GTGAGCGCCC CGATCTGATG GTGCTCGATC TGATGCTGCC CGATATCGAT
GGCGCCGATC TGACGCGCGC CATACGCGCC GACCCGCATA TCGCCGCAAT GCCGATTATT
ATGCTGACGG CACGGGTTGA CGACACCGAC AGGATTGTGG GGCTCGAACT CGGCGCCGAC
GATTACATCA CCAAGCCATT CAATCCACGC GAGGTCGTTG CGCGGGTGCG CGCTGTTCTG
CGCCGCACCA GCGGTGGAAC GCCGCAGCCA GCGGTCCTCC TCGAAGCAGG TCGGGTGCGG
CTCGATCCTG ATCGACACGA AGTGACCGTG GCAGGTCAAC CCCTCAACCT GACGCCGACC
GAGTTTCATC TGCTGCGCAT CTTTCTGAGC CTGCCAGGGC ATGCGTTTAC GCGCCGCGAA
TTGATCGAGG AAGGGGTTGG CTATGAGTAT GAAGGGATGG AACGCACGAT TGACAGCCAT
ATCAAGAATC TGCGCCGCAA ACTTGAATCG GTCGATGCCG GCATCAGGAT CGAAACCGTG
TATGGCGTGG GTTATCGCCT GAAGGTTGTC GCATGA
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| Protein sequence | MPQRILVVDD DRQITRLVSA YLEHAGFQTL TAHDGATALR LARSERPDLM VLDLMLPDID
GADLTRAIRA DPHIAAMPII MLTARVDDTD RIVGLELGAD DYITKPFNPR EVVARVRAVL
RRTSGGTPQP AVLLEAGRVR LDPDRHEVTV AGQPLNLTPT EFHLLRIFLS LPGHAFTRRE
LIEEGVGYEY EGMERTIDSH IKNLRRKLES VDAGIRIETV YGVGYRLKVV A
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