Gene Lreu_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0117 
Symbol 
ID5189909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp143682 
End bp144371 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content38% 
IMG OID640589909 
Producttwo component transcriptional regulator 
Protein accessionYP_001270726 
Protein GI148543356 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000111014 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC TAGTTGTTGA TGATGATAAA GAAATTGTTC AATTACTTGA AATTTACATC 
CGAAATGAAG GATATGAGCC AATTTCTGCT TACGACGGAA AAGAAGCATT GACAAAGCTA
AATACTAATC CTGATATCGG TCTGATTATT CTTGACTTAA TGATGCCAGA AATCGATGGA
ATGGATGTAA TTAAGCGGGT GCGGAAAGAT TCTGATATTC CAATTTTAGT GCTTTCAGCT
AAGACGGCAG ATATGGATAA GATACAAGGT CTAATCACTG GGGCGGATGA TTATGTTACT
AAGCCATTTA ATCCGCTTGA AGTAATGGCA CGAGTTAAAT CATTACTTCG TCGGAGCCAA
GGAGAAGTGA CAAATGATCA ACCAGATATT CTTAATGTTG GTCCATTATT AATCAATAAA
GATTCTCACG AGGTTAAGAC GATTAAAGGG GATGTAATTC AATTAACAGC CCTTGAATTT
GGTATCTTAT ACTTACTTGC CAGTCACCCT AATCGTGTTT TCTCAGCAGA TGACATTTTT
GAGCGGGTAT GGCAACAAGA AAGTGTCGTA TCAGCTAAAA CAGTCATGGT TCACGTGAGT
CATTTGCGGG ATAAAATTGA AGAAGCAACT AACGGTGAAA AGGTTATTCA AACTGTGTGG
GGTGTTGGTT ATAAGGTGGA AGACCACTAA
 
Protein sequence
MKILVVDDDK EIVQLLEIYI RNEGYEPISA YDGKEALTKL NTNPDIGLII LDLMMPEIDG 
MDVIKRVRKD SDIPILVLSA KTADMDKIQG LITGADDYVT KPFNPLEVMA RVKSLLRRSQ
GEVTNDQPDI LNVGPLLINK DSHEVKTIKG DVIQLTALEF GILYLLASHP NRVFSADDIF
ERVWQQESVV SAKTVMVHVS HLRDKIEEAT NGEKVIQTVW GVGYKVEDH