Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03384 |
Symbol | |
ID | 6778819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3642988 |
End bp | 3643653 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642756832 |
Product | response regulator |
Protein accession | YP_002127670 |
Protein GI | 196158181 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000742618 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAATAT TATTGGTTGA AGATGACAGG CCTTTATCTG ATGCGTTAGC CTTGTCCCTT AAAAATGCAA ACTATGCTGT TGACTGCGTT TATACAGGTG CAGACGCAAT GACAACCCTT AGTATCGGGC AAACCGATAT CGTTGTTCTT GATTTAGGCT TACCCGATAC AGATGGTTTG AATGTGCTTA AATCGATACG CAAAAAGAAT GCGACACTCC CGGTATTAAT TCTTACTGCA CGAGATAAAG TATCCGATAA AATCTCTGGG TTAGACGCAG GTGCTGATGA TTATTTACCA AAACCGTTTG AAATTGATGA ACTACTCGCC AGATTACGCG TTCTTGAACG CCGCCTAGGT ACGGCTTCTC AAACAATTAT TACGATTAAA AATGTGAGTC TTGATACCGC ACACCACACG TTGACAATCG ATAATGAGAC CATCCACTTA CCGAGACGCG AGCTTATGGT ACTTAAAGCG CTTGTAGAAA ATGCCGGGCG CGTATTGAGC AAAAATCAAC TCGAAAACAA ACTTTATGAA TGGGGCGAAG AAGTAGCAAG TAACACAATA GAGGTTCATG TGAGTCATTT GCGAAAAAAA ATGCCTGATA ATTTTATCAA AACCATTCGC GGCGTGGGTT ACTGTATATC TAAATCGGGA GAATGA
|
Protein sequence | MRILLVEDDR PLSDALALSL KNANYAVDCV YTGADAMTTL SIGQTDIVVL DLGLPDTDGL NVLKSIRKKN ATLPVLILTA RDKVSDKISG LDAGADDYLP KPFEIDELLA RLRVLERRLG TASQTIITIK NVSLDTAHHT LTIDNETIHL PRRELMVLKA LVENAGRVLS KNQLENKLYE WGEEVASNTI EVHVSHLRKK MPDNFIKTIR GVGYCISKSG E
|
| |