Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2813 |
Symbol | |
ID | 4809650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3321225 |
End bp | 3321920 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640108233 |
Product | two component transcriptional regulator |
Protein accession | YP_001039205 |
Protein GI | 125975295 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000151023 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAAT ATAATATTCT GGTATGCGAC GATGACAAAG CTATAGTGGA TGCACTGGAA ATTTATCTGA AACAGGAAGG GTACAATGTT GTTAAGGCAC ATACAGGAAA ACAGGCATTG AAAGCTTTGG AGGAAGAGAA GATCCATTTG GTTTTGATGG ATGTGATGAT GCCGGAATTG GACGGCCTGT CTGCAACCGT AAAAATCCGG GAAGAACTGA ACATACCTAT AATAATTCTG TCTGCAAAAT CTGAGGATAC GGACAAGATC ATAGGACTTA ACTTCGGTGC CGACGATTAC GTGACAAAGC CGTTCAATCC ACTCGAGCTT GTTGCAAGAG TAAAATCACA GCTTCGCAGA TATACCCAGC TTGGAGGCGC GGAGCGAAAA AGCGGGGTGT TGAAAAATGG AGGGCTTGAG CTTGATACTG AGGCGAAAGA GTTGAGAGTG GACGGTGAAT TGGTGAAACT GACGGCGACG GAATACGGTA TTGTGCTGTT CCTTATGAAA AATGCGGGCA AGGTGTTTTC AATTGACCAG ATATATGAAA ACGTATGGAA AGAACCGGCA TATTCGTCGG AAAACACAGT TGCGGTGCAT ATTCGGCGCA TAAGGGAGAA AATAGAAATC AATCCCAAAG AACCAAAATA CTTAAAGGTG GTGTGGGGCA TTGGATACAA AATGGAAAAA TATTAA
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Protein sequence | MDKYNILVCD DDKAIVDALE IYLKQEGYNV VKAHTGKQAL KALEEEKIHL VLMDVMMPEL DGLSATVKIR EELNIPIIIL SAKSEDTDKI IGLNFGADDY VTKPFNPLEL VARVKSQLRR YTQLGGAERK SGVLKNGGLE LDTEAKELRV DGELVKLTAT EYGIVLFLMK NAGKVFSIDQ IYENVWKEPA YSSENTVAVH IRRIREKIEI NPKEPKYLKV VWGIGYKMEK Y
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