Gene Cthe_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2813 
Symbol 
ID4809650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3321225 
End bp3321920 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content43% 
IMG OID640108233 
Producttwo component transcriptional regulator 
Protein accessionYP_001039205 
Protein GI125975295 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000151023 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAT ATAATATTCT GGTATGCGAC GATGACAAAG CTATAGTGGA TGCACTGGAA 
ATTTATCTGA AACAGGAAGG GTACAATGTT GTTAAGGCAC ATACAGGAAA ACAGGCATTG
AAAGCTTTGG AGGAAGAGAA GATCCATTTG GTTTTGATGG ATGTGATGAT GCCGGAATTG
GACGGCCTGT CTGCAACCGT AAAAATCCGG GAAGAACTGA ACATACCTAT AATAATTCTG
TCTGCAAAAT CTGAGGATAC GGACAAGATC ATAGGACTTA ACTTCGGTGC CGACGATTAC
GTGACAAAGC CGTTCAATCC ACTCGAGCTT GTTGCAAGAG TAAAATCACA GCTTCGCAGA
TATACCCAGC TTGGAGGCGC GGAGCGAAAA AGCGGGGTGT TGAAAAATGG AGGGCTTGAG
CTTGATACTG AGGCGAAAGA GTTGAGAGTG GACGGTGAAT TGGTGAAACT GACGGCGACG
GAATACGGTA TTGTGCTGTT CCTTATGAAA AATGCGGGCA AGGTGTTTTC AATTGACCAG
ATATATGAAA ACGTATGGAA AGAACCGGCA TATTCGTCGG AAAACACAGT TGCGGTGCAT
ATTCGGCGCA TAAGGGAGAA AATAGAAATC AATCCCAAAG AACCAAAATA CTTAAAGGTG
GTGTGGGGCA TTGGATACAA AATGGAAAAA TATTAA
 
Protein sequence
MDKYNILVCD DDKAIVDALE IYLKQEGYNV VKAHTGKQAL KALEEEKIHL VLMDVMMPEL 
DGLSATVKIR EELNIPIIIL SAKSEDTDKI IGLNFGADDY VTKPFNPLEL VARVKSQLRR
YTQLGGAERK SGVLKNGGLE LDTEAKELRV DGELVKLTAT EYGIVLFLMK NAGKVFSIDQ
IYENVWKEPA YSSENTVAVH IRRIREKIEI NPKEPKYLKV VWGIGYKMEK Y