| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0682 |
|---|
| Symbol | |
|---|
| ID | 8414972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 863635 |
|---|
| End bp | 864366 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645023655 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003181052 |
|---|
| Protein GI | 257790446 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC CGGCATCCAT AGTGATCATC GAGGACGACG CCGACATCAA CGAGGTGGTG
GCGGTGCATT TGCGCCGCAA CGGGTTCGCT TGCACGCAGG CCTTCTCGGG CAGCGAGGGG
CGGCTGCTGC TTTCCGGCTC CGAGCCGTTC GACCTCGTGA TCACCGATCT CATGCTGCCG
GGCATGGCGG GCGAGGACGT GGTGCGCCTC GTGCGCGCCC GCGGCGACAT GCCCGTCATC
GTGATGTCGG CGCGCACGAC CGCCGCCGAC AAGGTGGCGC TGCTGAAGCT GGGCGCCGAC
GATTACCTGA CCAAGCCCTT CGACCTCGAC GAGCTGCTGG CTCGCGTGCA GGTGCAGCTG
CGCCACGCCG ACGTTCGCCG CGCATCCGCG TCCGGCGCGC CTTCCGACGA GCGCCTCCCC
GAGCCCGCCG CCGCAGCCGC GATGCGCTAC AAAGACTGGA CGCTCGACGT CGACGCCCGC
ACGCTTTCGG TGCAGGGCGA GCCCGTGCGC CTCACGCGCC TGGAGTTCAA CATCCTCGAA
GCTCTCGTGC GACGTCCGCG CAAGGTGTTC ACGAAGCGCG AGCTGTTCGA GATCGCATGG
AACGAGGAAA GCGCGGTCGA GGAGAAGGCC ATCAACGTGC ACGTCAGCAA CATCCGCAGC
AAGCTGCGCG CCGCGCATTC GGCCGGCGAG ATAGAAACGG TATGGGGCAT CGGCTTCAAG
CTGGCCGAAT GA
|
|---|
| Protein sequence | MSEPASIVII EDDADINEVV AVHLRRNGFA CTQAFSGSEG RLLLSGSEPF DLVITDLMLP
GMAGEDVVRL VRARGDMPVI VMSARTTAAD KVALLKLGAD DYLTKPFDLD ELLARVQVQL
RHADVRRASA SGAPSDERLP EPAAAAAMRY KDWTLDVDAR TLSVQGEPVR LTRLEFNILE
ALVRRPRKVF TKRELFEIAW NEESAVEEKA INVHVSNIRS KLRAAHSAGE IETVWGIGFK
LAE
|
|---|
| |