More than 300 homologs were found in PanDaTox collection
for query gene Amir_1928 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_1928  binding-protein-dependent transport systems inner membrane component  100 
 
 
298 aa  577  1e-164  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0911213  n/a   
 
 
-
 
NC_013521  Sked_06580  carbohydrate ABC transporter membrane protein  44.71 
 
 
318 aa  239  5e-62  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0102  binding-protein-dependent transport systems inner membrane component  40.42 
 
 
310 aa  223  3e-57  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0186923 
 
 
-
 
NC_013131  Caci_4417  binding-protein-dependent transport systems inner membrane component  44.57 
 
 
305 aa  206  4e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0929  MalF-type ABC sugar transport systems permease component  40.4 
 
 
308 aa  205  7e-52  Bifidobacterium longum DJO10A  Bacteria  normal  0.574591  n/a   
 
 
-
 
NC_012669  Bcav_1455  binding-protein-dependent transport systems inner membrane component  42.91 
 
 
314 aa  201  9.999999999999999e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.51197  normal 
 
 
-
 
NC_012669  Bcav_3303  binding-protein-dependent transport systems inner membrane component  43.21 
 
 
299 aa  198  1.0000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.0062931 
 
 
-
 
NC_013093  Amir_2572  binding-protein-dependent transport systems inner membrane component  41.29 
 
 
278 aa  196  4.0000000000000005e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.264075  n/a   
 
 
-
 
NC_010816  BLD_1007  MalF-type ABC sugar transport systems permease component  38.01 
 
 
320 aa  191  1e-47  Bifidobacterium longum DJO10A  Bacteria  normal  0.324625  n/a   
 
 
-
 
NC_013172  Bfae_04080  carbohydrate ABC transporter membrane protein  36.65 
 
 
294 aa  189  5e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0379  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
295 aa  184  2.0000000000000003e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  0.767086  normal 
 
 
-
 
NC_009664  Krad_4189  binding-protein-dependent transport systems inner membrane component  44.29 
 
 
316 aa  183  3e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.255548  normal  0.771693 
 
 
-
 
NC_013172  Bfae_04010  carbohydrate ABC transporter membrane protein  38.28 
 
 
312 aa  180  2.9999999999999997e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2831  binding-protein-dependent transport systems inner membrane component  44.21 
 
 
287 aa  177  2e-43  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0049  binding-protein-dependent transport systems inner membrane component  40.29 
 
 
297 aa  174  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5098  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
296 aa  167  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0579092  normal  0.0820796 
 
 
-
 
NC_013521  Sked_03910  carbohydrate ABC transporter membrane protein  37.62 
 
 
326 aa  167  2e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.669588 
 
 
-
 
NC_013174  Jden_0309  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
304 aa  167  2e-40  Jonesia denitrificans DSM 20603  Bacteria  normal  0.058143  normal  0.103929 
 
 
-
 
NC_013172  Bfae_17030  carbohydrate ABC transporter membrane protein  37.28 
 
 
313 aa  166  4e-40  Brachybacterium faecium DSM 4810  Bacteria  hitchhiker  0.000718721  n/a   
 
 
-
 
NC_012669  Bcav_4058  binding-protein-dependent transport systems inner membrane component  37.8 
 
 
314 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1763  MalF-type ABC sugar transport systems permease component  34.78 
 
 
323 aa  161  1e-38  Bifidobacterium longum DJO10A  Bacteria  normal  0.0129756  n/a   
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  37.41 
 
 
308 aa  148  1.0000000000000001e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
315 aa  145  1e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  31.52 
 
 
311 aa  138  1e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011371  Rleg2_6525  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
286 aa  127  2.0000000000000002e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.728774  normal  0.302995 
 
 
-
 
NC_010003  Pmob_0827  binding-protein-dependent transport systems inner membrane component  31.72 
 
 
299 aa  127  3e-28  Petrotoga mobilis SJ95  Bacteria  normal  0.175132  n/a   
 
 
-
 
NC_012852  Rleg_6113  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
286 aa  126  4.0000000000000003e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.453278  normal 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  31.88 
 
 
293 aa  126  5e-28  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
298 aa  125  1e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  36.12 
 
 
306 aa  124  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0131  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
320 aa  124  2e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  0.495335  normal 
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
316 aa  124  2e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
293 aa  124  2e-27  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_012669  Bcav_3983  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
302 aa  123  4e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.159905  normal 
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
297 aa  122  5e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_013093  Amir_1786  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
335 aa  120  3e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0186858  n/a   
 
 
-
 
NC_012669  Bcav_2273  binding-protein-dependent transport systems inner membrane component  30.98 
 
 
302 aa  120  3e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3307  sugar transport system (permease)  31.11 
 
 
325 aa  119  7e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.175437 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
300 aa  119  7e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0935  multiple sugar transport system permease protein  28.78 
 
 
328 aa  118  9.999999999999999e-26  Thermobifida fusca YX  Bacteria  normal  0.36894  n/a   
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
294 aa  116  3.9999999999999997e-25  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0285  binding-protein-dependent transport systems inner membrane component  28.47 
 
 
327 aa  116  3.9999999999999997e-25  Meiothermus ruber DSM 1279  Bacteria  normal  0.0175684  normal  0.996665 
 
 
-
 
NC_011899  Hore_04280  binding-protein-dependent transport systems inner membrane component  27.59 
 
 
302 aa  115  6.9999999999999995e-25  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  29.35 
 
 
293 aa  115  8.999999999999998e-25  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_009654  Mmwyl1_2714  binding-protein-dependent transport systems inner membrane component  29.39 
 
 
293 aa  115  8.999999999999998e-25  Marinomonas sp. MWYL1  Bacteria  normal  0.548655  normal 
 
 
-
 
NC_013510  Tcur_1735  binding-protein-dependent transport systems inner membrane component  31.21 
 
 
328 aa  114  1.0000000000000001e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  0.152171  n/a   
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  27.42 
 
 
316 aa  115  1.0000000000000001e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
309 aa  115  1.0000000000000001e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_014213  Mesil_3393  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
291 aa  115  1.0000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  0.199241  normal  0.935882 
 
 
-
 
NC_011661  Dtur_0507  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
299 aa  114  2.0000000000000002e-24  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000030377  n/a   
 
 
-
 
NC_012917  PC1_0737  binding-protein-dependent transport systems inner membrane component  27.67 
 
 
293 aa  113  3e-24  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
305 aa  114  3e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  33.46 
 
 
287 aa  113  4.0000000000000004e-24  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5460  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
334 aa  112  5e-24  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1134  binding-protein-dependent transport systems inner membrane component  27.94 
 
 
300 aa  112  6e-24  Clostridium cellulolyticum H10  Bacteria  normal  0.454536  n/a   
 
 
-
 
NC_014165  Tbis_0841  binding-protein-dependent transporter inner membrane component  29.15 
 
 
337 aa  112  7.000000000000001e-24  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.203798 
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  26.92 
 
 
310 aa  112  7.000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_013526  Tter_2496  binding-protein-dependent transport systems inner membrane component  31.07 
 
 
311 aa  112  8.000000000000001e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  31.65 
 
 
288 aa  112  9e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  28.78 
 
 
294 aa  112  1.0000000000000001e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_009380  Strop_1558  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
322 aa  112  1.0000000000000001e-23  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal  0.637369 
 
 
-
 
NC_007493  RSP_1443  ABC sugar transporter, inner membrane subunit  26.55 
 
 
303 aa  110  2.0000000000000002e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0903613  n/a   
 
 
-
 
NC_009049  Rsph17029_0092  binding-protein-dependent transport systems inner membrane component  26.55 
 
 
296 aa  110  2.0000000000000002e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
316 aa  111  2.0000000000000002e-23  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0973  binding-protein-dependent transport systems inner membrane component  27.67 
 
 
293 aa  111  2.0000000000000002e-23  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
297 aa  110  2.0000000000000002e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29440  permease component of ABC-type sugar transporter  29.39 
 
 
318 aa  110  3e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  29.5 
 
 
300 aa  110  3e-23  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
314 aa  110  3e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  29.5 
 
 
300 aa  110  3e-23  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1947  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
325 aa  110  4.0000000000000004e-23  Jannaschia sp. CCS1  Bacteria  normal  0.984077  normal 
 
 
-
 
NC_009953  Sare_1507  binding-protein-dependent transport systems inner membrane component  32 
 
 
323 aa  110  4.0000000000000004e-23  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000203032 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
353 aa  110  4.0000000000000004e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_013205  Aaci_0914  binding-protein-dependent transport systems inner membrane component  30.31 
 
 
310 aa  109  5e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
305 aa  109  6e-23  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_013525  Tter_0398  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
312 aa  108  8.000000000000001e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  31.14 
 
 
300 aa  108  9.000000000000001e-23  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7172  sugar transport system (permease)  30.63 
 
 
323 aa  108  1e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0377247 
 
 
-
 
NC_014151  Cfla_2400  binding-protein-dependent transport systems inner membrane component  30.17 
 
 
338 aa  108  1e-22  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00254991 
 
 
-
 
NC_013739  Cwoe_5440  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
329 aa  108  1e-22  Conexibacter woesei DSM 14684  Bacteria  normal  0.811614  normal 
 
 
-
 
NC_013739  Cwoe_4453  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
319 aa  108  2e-22  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4441  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
320 aa  107  2e-22  Paracoccus denitrificans PD1222  Bacteria  normal  0.0272526  normal 
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  29.31 
 
 
322 aa  108  2e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  33.78 
 
 
311 aa  107  2e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  29.36 
 
 
291 aa  107  2e-22  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
415 aa  107  2e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_013946  Mrub_2809  binding-protein-dependent transport systems inner membrane component  29.7 
 
 
279 aa  107  2e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.232459 
 
 
-
 
NC_013530  Xcel_0918  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
298 aa  107  3e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
308 aa  107  3e-22  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_013205  Aaci_2236  binding-protein-dependent transport systems inner membrane component  28.04 
 
 
315 aa  106  5e-22  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_19290  carbohydrate ABC transporter membrane protein  31.43 
 
 
328 aa  106  5e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0926617  n/a   
 
 
-
 
NC_009664  Krad_3963  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
326 aa  106  5e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0380307  normal  0.973635 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  32.63 
 
 
317 aa  105  8e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  29.92 
 
 
294 aa  105  9e-22  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  25.71 
 
 
315 aa  105  1e-21  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0392  binding-protein-dependent transport systems inner membrane component  29.08 
 
 
328 aa  105  1e-21  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_011370  Rleg2_6091  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
292 aa  105  1e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1880  binding-protein-dependent transport systems inner membrane component  27.97 
 
 
316 aa  104  2e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.2607 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  30.5 
 
 
307 aa  103  3e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  28.33 
 
 
321 aa  103  3e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
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