More than 300 homologs were found in PanDaTox collection
for query gene Caci_5098 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_5098  binding-protein-dependent transport systems inner membrane component  100 
 
 
296 aa  588  1e-167  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0579092  normal  0.0820796 
 
 
-
 
NC_013521  Sked_03910  carbohydrate ABC transporter membrane protein  49.08 
 
 
326 aa  251  9.000000000000001e-66  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.669588 
 
 
-
 
NC_013172  Bfae_17030  carbohydrate ABC transporter membrane protein  48.45 
 
 
313 aa  239  2.9999999999999997e-62  Brachybacterium faecium DSM 4810  Bacteria  hitchhiker  0.000718721  n/a   
 
 
-
 
NC_013174  Jden_0309  binding-protein-dependent transport systems inner membrane component  48.65 
 
 
304 aa  236  3e-61  Jonesia denitrificans DSM 20603  Bacteria  normal  0.058143  normal  0.103929 
 
 
-
 
NC_013172  Bfae_04010  carbohydrate ABC transporter membrane protein  48.03 
 
 
312 aa  234  2.0000000000000002e-60  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3303  binding-protein-dependent transport systems inner membrane component  43.66 
 
 
299 aa  207  1e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.0062931 
 
 
-
 
NC_013174  Jden_0379  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
295 aa  196  4.0000000000000005e-49  Jonesia denitrificans DSM 20603  Bacteria  normal  0.767086  normal 
 
 
-
 
NC_013172  Bfae_04080  carbohydrate ABC transporter membrane protein  40.08 
 
 
294 aa  194  2e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0102  binding-protein-dependent transport systems inner membrane component  36.75 
 
 
310 aa  190  2e-47  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0186923 
 
 
-
 
NC_010816  BLD_0929  MalF-type ABC sugar transport systems permease component  38.98 
 
 
308 aa  186  4e-46  Bifidobacterium longum DJO10A  Bacteria  normal  0.574591  n/a   
 
 
-
 
NC_013521  Sked_06580  carbohydrate ABC transporter membrane protein  37.07 
 
 
318 aa  184  2.0000000000000003e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4189  binding-protein-dependent transport systems inner membrane component  39.19 
 
 
316 aa  177  2e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.255548  normal  0.771693 
 
 
-
 
NC_013131  Caci_4417  binding-protein-dependent transport systems inner membrane component  38.63 
 
 
305 aa  176  3e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2572  binding-protein-dependent transport systems inner membrane component  38.2 
 
 
278 aa  175  7e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.264075  n/a   
 
 
-
 
NC_010816  BLD_1007  MalF-type ABC sugar transport systems permease component  37.8 
 
 
320 aa  175  7e-43  Bifidobacterium longum DJO10A  Bacteria  normal  0.324625  n/a   
 
 
-
 
NC_012669  Bcav_1455  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
314 aa  174  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.51197  normal 
 
 
-
 
NC_013947  Snas_0049  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
297 aa  170  2e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_4058  binding-protein-dependent transport systems inner membrane component  34.46 
 
 
314 aa  163  4.0000000000000004e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1928  binding-protein-dependent transport systems inner membrane component  35.79 
 
 
298 aa  157  2e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0911213  n/a   
 
 
-
 
NC_010816  BLD_1763  MalF-type ABC sugar transport systems permease component  34.39 
 
 
323 aa  154  1e-36  Bifidobacterium longum DJO10A  Bacteria  normal  0.0129756  n/a   
 
 
-
 
NC_008010  Dgeo_2831  binding-protein-dependent transport systems inner membrane component  42.86 
 
 
287 aa  153  2.9999999999999998e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2532  binding-protein-dependent transport systems inner membrane component  27.48 
 
 
417 aa  126  5e-28  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.636087 
 
 
-
 
NC_013172  Bfae_29440  permease component of ABC-type sugar transporter  32.14 
 
 
318 aa  125  1e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3558  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
295 aa  123  4e-27  Chelativorans sp. BNC1  Bacteria  normal  0.727517  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  32.75 
 
 
317 aa  122  6e-27  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_009049  Rsph17029_0092  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
296 aa  118  9.999999999999999e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1443  ABC sugar transporter, inner membrane subunit  29.55 
 
 
303 aa  118  1.9999999999999998e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0903613  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  27.16 
 
 
415 aa  117  3e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  31.58 
 
 
287 aa  115  1.0000000000000001e-24  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0753  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
312 aa  110  2.0000000000000002e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.308461  normal 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  28.09 
 
 
293 aa  111  2.0000000000000002e-23  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  27.76 
 
 
293 aa  110  3e-23  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
291 aa  110  3e-23  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_009664  Krad_0964  binding-protein-dependent transport systems inner membrane component  30.13 
 
 
313 aa  110  3e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.194798  decreased coverage  0.00518822 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
318 aa  109  6e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  28.18 
 
 
318 aa  108  9.000000000000001e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_007802  Jann_2587  binding-protein-dependent transport systems inner membrane component  27.7 
 
 
314 aa  108  1e-22  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.000137508  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  29.79 
 
 
320 aa  107  2e-22  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
299 aa  107  3e-22  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2091  binding-protein-dependent transport systems inner membrane component  28.9 
 
 
292 aa  107  3e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
294 aa  106  4e-22  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
314 aa  106  4e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008025  Dgeo_1168  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
310 aa  106  5e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.155614  normal 
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  29.87 
 
 
310 aa  105  7e-22  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  29.6 
 
 
315 aa  105  9e-22  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0769  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
313 aa  105  9e-22  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  29.21 
 
 
309 aa  105  1e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
317 aa  103  3e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  28.01 
 
 
318 aa  103  3e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  29.37 
 
 
294 aa  103  3e-21  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_014150  Bmur_1089  binding-protein-dependent transport systems inner membrane component  26.69 
 
 
290 aa  102  5e-21  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000136101  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  24.83 
 
 
295 aa  103  5e-21  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_2048  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
332 aa  102  7e-21  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  28.37 
 
 
318 aa  101  1e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
293 aa  101  1e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_009832  Spro_2846  binding-protein-dependent transport systems inner membrane component  29.04 
 
 
313 aa  102  1e-20  Serratia proteamaculans 568  Bacteria  normal  0.149421  normal  0.0970123 
 
 
-
 
NC_007347  Reut_A2051  binding-protein dependent transport system inner membrane protein  29.77 
 
 
293 aa  101  2e-20  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_19290  carbohydrate ABC transporter membrane protein  26.74 
 
 
328 aa  101  2e-20  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0926617  n/a   
 
 
-
 
NC_008541  Arth_0481  binding-protein-dependent transport systems inner membrane component  31.11 
 
 
316 aa  100  2e-20  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00640866  n/a   
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  26.01 
 
 
315 aa  101  2e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
313 aa  100  2e-20  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
310 aa  101  2e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
283 aa  100  3e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  29.64 
 
 
310 aa  100  4e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
298 aa  100  4e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  29.64 
 
 
310 aa  100  4e-20  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1686  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
312 aa  100  4e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.746865  normal 
 
 
-
 
NC_009654  Mmwyl1_2714  binding-protein-dependent transport systems inner membrane component  28.72 
 
 
293 aa  100  4e-20  Marinomonas sp. MWYL1  Bacteria  normal  0.548655  normal 
 
 
-
 
NC_009667  Oant_2484  binding-protein-dependent transport systems inner membrane component  29.08 
 
 
318 aa  100  4e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.575298  n/a   
 
 
-
 
NC_007951  Bxe_A0447  ABC sugar transporter, inner membrane subunit  27.7 
 
 
294 aa  99.4  6e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.316903  normal 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  25.8 
 
 
311 aa  99.4  7e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  33.61 
 
 
297 aa  99.4  7e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  28.02 
 
 
314 aa  99  8e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  28.02 
 
 
314 aa  99  8e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  29.29 
 
 
310 aa  99  8e-20  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
330 aa  99  8e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_013595  Sros_6550  putative transmembrane binding-protein-dependent transporter  30.16 
 
 
303 aa  99  8e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.000015909 
 
 
-
 
NC_010681  Bphyt_3510  binding-protein-dependent transport systems inner membrane component  27.36 
 
 
294 aa  99  9e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0526035  normal  0.0342542 
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  29.29 
 
 
310 aa  98.2  1e-19  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  29.29 
 
 
310 aa  98.2  1e-19  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1867  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
312 aa  98.6  1e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0850  binding-protein-dependent transport systems inner membrane component  28.43 
 
 
293 aa  98.6  1e-19  Ruegeria sp. TM1040  Bacteria  normal  0.16436  normal 
 
 
-
 
NC_012669  Bcav_0555  binding-protein-dependent transport systems inner membrane component  27.55 
 
 
328 aa  98.2  1e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.913769 
 
 
-
 
NC_012669  Bcav_1541  binding-protein-dependent transport systems inner membrane component  28.69 
 
 
327 aa  98.2  1e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.128939 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
307 aa  98.6  1e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_011899  Hore_04280  binding-protein-dependent transport systems inner membrane component  27.67 
 
 
302 aa  98.2  1e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  29.29 
 
 
310 aa  98.6  1e-19  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  28.29 
 
 
316 aa  98.6  1e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_003295  RSc1265  SN-glycerol-3-phosphate transmembrane ABC transporter protein  29.1 
 
 
293 aa  98.2  2e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
310 aa  97.4  2e-19  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  27.34 
 
 
317 aa  97.8  2e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008060  Bcen_2711  binding-protein-dependent transport systems inner membrane component  28.2 
 
 
294 aa  97.8  2e-19  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.691644  n/a   
 
 
-
 
NC_008390  Bamb_0315  binding-protein-dependent transport systems inner membrane component  27.87 
 
 
313 aa  97.4  2e-19  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0396  binding-protein-dependent transport systems inner membrane component  28.2 
 
 
294 aa  97.8  2e-19  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2809  binding-protein-dependent transport systems inner membrane component  29.73 
 
 
279 aa  97.8  2e-19  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.232459 
 
 
-
 
NC_010551  BamMC406_0324  binding-protein-dependent transport systems inner membrane component  27.87 
 
 
294 aa  97.8  2e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  0.594237  normal  0.576949 
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  28.15 
 
 
319 aa  97.4  3e-19  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  29.29 
 
 
310 aa  97.4  3e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2847  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
318 aa  97.4  3e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  32.07 
 
 
305 aa  96.7  4e-19  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
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