Gene Rsph17029_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0092 
Symbol 
ID4896294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp106020 
End bp106910 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID640110675 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001041984 
Protein GI126460870 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTCC TGCGCCACCA CCTGCCCCAC TTCCTGATGA TCGCACCGTT CCTCGTGCTG 
TTCGGCGCCT TCTTCCTCTA TCCCATCCTC AGTGGGCTCT ATTACAGCTT CCACGACTGG
AACGGCGTGC GCGAGCCGGT CTATGTCGGG CTGGAAAACT ACACGAGGCT GCTCGGGTCG
CGCGACTTCT CGCGCGCGAT GTGGAACCTG TTCCAGTATA TCGTCATCAC GGTGCCGCTG
GGGCTGACGG TCGCCTTCTG CCTTGCGCTG CTGGTCGACA GCTTCACCGG GCGCTGGGCC
AACTTCTTCC GCAACGCCTA TTTCCTGCCG GTGGTGCTGC CTGCCTTTCT GGCGGCGACG
ATCTGGCGCT GGATCTACGC GCCGAACTTC GGCCTCCTGA ACATGATGCT GGGCTGGGTC
GGGGCAGAAC CCGTCAGCTT CCTCAATGAC ACGAGCACCA TGCTCTATGC GCTGATCGCG
GTGGATGTGT GGGTTTCGGC CGGCTTCAAC ATGGTCATCA TCCTGGCCGG GCTGAAGAAC
ATCCCCGCCG ATCTCTACGA GGCCGCGCGG CTCGACGGCG CCAGCAAGCT GCAGCAGGTC
ATCCACATCA CCCTTCCGAT GCTGGCGCCG GTGCTGTTCT TCGTGCTGAC CTATGCCGTC
ATCTCGGCCA TGCAGGTCTT CGACACGCCC TGGCTGCTGA CCGGCTCCTC CTTCTCGGAA
TATGGCGGAC GTCGCGGGGC GCTGCTCTTC CCGGTCATGG ACATGATGGG ACGCGCCTTC
GGCGGCGTGC AGTTCGGCCT CGCCTCGGCC TACGGCTTCC TGCTGACCAT CGCCATCATC
GCCGTCACCG CCCTTCTCTT CGCGGTCCGC ACATGGAGCA ATCGTCGATG A
 
Protein sequence
MRVLRHHLPH FLMIAPFLVL FGAFFLYPIL SGLYYSFHDW NGVREPVYVG LENYTRLLGS 
RDFSRAMWNL FQYIVITVPL GLTVAFCLAL LVDSFTGRWA NFFRNAYFLP VVLPAFLAAT
IWRWIYAPNF GLLNMMLGWV GAEPVSFLND TSTMLYALIA VDVWVSAGFN MVIILAGLKN
IPADLYEAAR LDGASKLQQV IHITLPMLAP VLFFVLTYAV ISAMQVFDTP WLLTGSSFSE
YGGRRGALLF PVMDMMGRAF GGVQFGLASA YGFLLTIAII AVTALLFAVR TWSNRR