More than 300 homologs were found in PanDaTox collection
for query gene Bcav_3303 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_3303  binding-protein-dependent transport systems inner membrane component  100 
 
 
299 aa  588  1e-167  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.0062931 
 
 
-
 
NC_013172  Bfae_04080  carbohydrate ABC transporter membrane protein  66.78 
 
 
294 aa  365  1e-100  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0049  binding-protein-dependent transport systems inner membrane component  55.36 
 
 
297 aa  291  1e-77  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0379  binding-protein-dependent transport systems inner membrane component  53.36 
 
 
295 aa  262  4.999999999999999e-69  Jonesia denitrificans DSM 20603  Bacteria  normal  0.767086  normal 
 
 
-
 
NC_009664  Krad_4189  binding-protein-dependent transport systems inner membrane component  48.66 
 
 
316 aa  247  2e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.255548  normal  0.771693 
 
 
-
 
NC_010816  BLD_1763  MalF-type ABC sugar transport systems permease component  43.26 
 
 
323 aa  227  2e-58  Bifidobacterium longum DJO10A  Bacteria  normal  0.0129756  n/a   
 
 
-
 
NC_010816  BLD_0929  MalF-type ABC sugar transport systems permease component  43.36 
 
 
308 aa  215  8e-55  Bifidobacterium longum DJO10A  Bacteria  normal  0.574591  n/a   
 
 
-
 
NC_013131  Caci_5098  binding-protein-dependent transport systems inner membrane component  44.09 
 
 
296 aa  213  3.9999999999999995e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0579092  normal  0.0820796 
 
 
-
 
NC_013172  Bfae_17030  carbohydrate ABC transporter membrane protein  43.29 
 
 
313 aa  212  5.999999999999999e-54  Brachybacterium faecium DSM 4810  Bacteria  hitchhiker  0.000718721  n/a   
 
 
-
 
NC_012669  Bcav_1455  binding-protein-dependent transport systems inner membrane component  40.85 
 
 
314 aa  209  6e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.51197  normal 
 
 
-
 
NC_013521  Sked_03910  carbohydrate ABC transporter membrane protein  42.91 
 
 
326 aa  207  2e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.669588 
 
 
-
 
NC_013131  Caci_4417  binding-protein-dependent transport systems inner membrane component  41.16 
 
 
305 aa  205  9e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_06580  carbohydrate ABC transporter membrane protein  42.7 
 
 
318 aa  203  3e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0102  binding-protein-dependent transport systems inner membrane component  38.68 
 
 
310 aa  201  8e-51  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0186923 
 
 
-
 
NC_013172  Bfae_04010  carbohydrate ABC transporter membrane protein  41.47 
 
 
312 aa  201  9.999999999999999e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2572  binding-protein-dependent transport systems inner membrane component  42.4 
 
 
278 aa  200  1.9999999999999998e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.264075  n/a   
 
 
-
 
NC_010816  BLD_1007  MalF-type ABC sugar transport systems permease component  41.61 
 
 
320 aa  198  1.0000000000000001e-49  Bifidobacterium longum DJO10A  Bacteria  normal  0.324625  n/a   
 
 
-
 
NC_013174  Jden_0309  binding-protein-dependent transport systems inner membrane component  41.61 
 
 
304 aa  196  4.0000000000000005e-49  Jonesia denitrificans DSM 20603  Bacteria  normal  0.058143  normal  0.103929 
 
 
-
 
NC_008010  Dgeo_2831  binding-protein-dependent transport systems inner membrane component  45.19 
 
 
287 aa  196  6e-49  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1928  binding-protein-dependent transport systems inner membrane component  43.21 
 
 
298 aa  189  4e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0911213  n/a   
 
 
-
 
NC_012669  Bcav_4058  binding-protein-dependent transport systems inner membrane component  38.7 
 
 
314 aa  185  7e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_2111  binding-protein-dependent transport systems inner membrane component  32.04 
 
 
306 aa  147  3e-34  Clostridium cellulolyticum H10  Bacteria  normal  0.157384  n/a   
 
 
-
 
NC_008254  Meso_3558  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
295 aa  136  3.0000000000000003e-31  Chelativorans sp. BNC1  Bacteria  normal  0.727517  n/a   
 
 
-
 
NC_011661  Dtur_0507  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
299 aa  133  3.9999999999999996e-30  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000030377  n/a   
 
 
-
 
NC_011899  Hore_04280  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
302 aa  132  5e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1443  ABC sugar transporter, inner membrane subunit  30.17 
 
 
303 aa  132  6e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0903613  n/a   
 
 
-
 
NC_009049  Rsph17029_0092  binding-protein-dependent transport systems inner membrane component  30.17 
 
 
296 aa  132  6e-30  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
315 aa  129  6e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_013172  Bfae_29440  permease component of ABC-type sugar transporter  32.46 
 
 
318 aa  127  2.0000000000000002e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
308 aa  126  5e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  35.92 
 
 
288 aa  123  3e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  32.27 
 
 
306 aa  122  5e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
294 aa  122  6e-27  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0827  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
299 aa  122  6e-27  Petrotoga mobilis SJ95  Bacteria  normal  0.175132  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  30.31 
 
 
293 aa  122  9.999999999999999e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
300 aa  121  9.999999999999999e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5702  binding-protein-dependent transport systems inner membrane component  29.86 
 
 
300 aa  120  1.9999999999999998e-26  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  30 
 
 
317 aa  120  3e-26  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
297 aa  120  3.9999999999999996e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  31.36 
 
 
294 aa  119  4.9999999999999996e-26  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_013526  Tter_2496  binding-protein-dependent transport systems inner membrane component  32.1 
 
 
311 aa  118  9.999999999999999e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0481  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
316 aa  115  6.9999999999999995e-25  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00640866  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
298 aa  115  7.999999999999999e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  29.33 
 
 
295 aa  115  8.999999999999998e-25  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  35.96 
 
 
306 aa  114  2.0000000000000002e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
330 aa  114  2.0000000000000002e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_013411  GYMC61_3365  binding-protein-dependent transport systems inner membrane component  30 
 
 
292 aa  114  2.0000000000000002e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_2095  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
316 aa  112  5e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000245953 
 
 
-
 
NC_011992  Dtpsy_0790  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
293 aa  112  6e-24  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0861  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
293 aa  112  7.000000000000001e-24  Acidovorax sp. JS42  Bacteria  normal  normal  0.533828 
 
 
-
 
NC_014151  Cfla_3051  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
338 aa  112  7.000000000000001e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.335951  normal  0.466485 
 
 
-
 
NC_013093  Amir_1786  binding-protein-dependent transport systems inner membrane component  32.57 
 
 
335 aa  112  8.000000000000001e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0186858  n/a   
 
 
-
 
NC_013421  Pecwa_0973  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
293 aa  112  9e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  28.24 
 
 
318 aa  111  1.0000000000000001e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
310 aa  112  1.0000000000000001e-23  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  31.87 
 
 
308 aa  112  1.0000000000000001e-23  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  31.96 
 
 
287 aa  111  2.0000000000000002e-23  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  30.43 
 
 
310 aa  111  2.0000000000000002e-23  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3588  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
338 aa  110  2.0000000000000002e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.786552  normal 
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  30.04 
 
 
314 aa  110  2.0000000000000002e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_012669  Bcav_0555  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
328 aa  110  3e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.913769 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  29.32 
 
 
353 aa  110  3e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_012917  PC1_0737  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
293 aa  110  3e-23  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1875  MalF-type ABC sugar transport systems permease component  30.13 
 
 
350 aa  110  3e-23  Bifidobacterium longum DJO10A  Bacteria  normal  0.0432685  n/a   
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
309 aa  110  4.0000000000000004e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  32.44 
 
 
293 aa  109  4.0000000000000004e-23  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0285  binding-protein-dependent transport systems inner membrane component  28.28 
 
 
327 aa  109  5e-23  Meiothermus ruber DSM 1279  Bacteria  normal  0.0175684  normal  0.996665 
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  30.21 
 
 
328 aa  109  5e-23  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  29.35 
 
 
316 aa  109  6e-23  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_008010  Dgeo_2860  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
322 aa  108  8.000000000000001e-23  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.396467  n/a   
 
 
-
 
NC_009504  BOV_A0280  sugar ABC transporter, permease protein  27.19 
 
 
325 aa  108  8.000000000000001e-23  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  28.76 
 
 
318 aa  108  9.000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_013946  Mrub_2809  binding-protein-dependent transport systems inner membrane component  31.72 
 
 
279 aa  108  9.000000000000001e-23  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.232459 
 
 
-
 
NC_004311  BRA0305  sugar ABC transporter, permease protein  26.88 
 
 
325 aa  108  1e-22  Brucella suis 1330  Bacteria  normal  0.0474821  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  32 
 
 
293 aa  108  1e-22  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  29.43 
 
 
311 aa  108  1e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  30.24 
 
 
310 aa  108  1e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  29.9 
 
 
310 aa  107  2e-22  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  29.9 
 
 
310 aa  107  2e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
311 aa  107  2e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  30.17 
 
 
301 aa  108  2e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2273  binding-protein-dependent transport systems inner membrane component  28.67 
 
 
302 aa  108  2e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
307 aa  107  2e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  27.39 
 
 
320 aa  107  2e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_012028  Hlac_2863  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
356 aa  107  3e-22  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_009664  Krad_0964  binding-protein-dependent transport systems inner membrane component  28.46 
 
 
313 aa  107  3e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.194798  decreased coverage  0.00518822 
 
 
-
 
NC_012669  Bcav_0179  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
315 aa  107  3e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0229  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
312 aa  106  4e-22  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.772545  normal  0.492978 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
314 aa  106  4e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  30.17 
 
 
311 aa  106  5e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_009620  Smed_3811  binding-protein-dependent transport systems inner membrane component  26.98 
 
 
328 aa  106  5e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  30.24 
 
 
319 aa  106  6e-22  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_009718  Fnod_0449  binding-protein-dependent transport systems inner membrane component  30.12 
 
 
295 aa  106  6e-22  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.982578  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  27.04 
 
 
415 aa  105  7e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  29.55 
 
 
310 aa  105  8e-22  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  30.58 
 
 
310 aa  105  8e-22  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  29.55 
 
 
310 aa  105  8e-22  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_00850  carbohydrate ABC transporter membrane protein  29.64 
 
 
320 aa  105  8e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  30.24 
 
 
319 aa  105  9e-22  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_013530  Xcel_2796  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
355 aa  105  9e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
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