More than 300 homologs were found in PanDaTox collection
for query gene Dgeo_2860 on replicon NC_008010
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008010  Dgeo_2860  binding-protein-dependent transport systems inner membrane component  100 
 
 
322 aa  640    Deinococcus geothermalis DSM 11300  Bacteria  normal  0.396467  n/a   
 
 
-
 
NC_013946  Mrub_0285  binding-protein-dependent transport systems inner membrane component  58.81 
 
 
327 aa  366  1e-100  Meiothermus ruber DSM 1279  Bacteria  normal  0.0175684  normal  0.996665 
 
 
-
 
NC_007908  Rfer_1100  binding-protein-dependent transport systems inner membrane component  55.97 
 
 
311 aa  332  5e-90  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.0016702  n/a   
 
 
-
 
NC_009784  VIBHAR_06940  hypothetical protein  45.94 
 
 
329 aa  288  7e-77  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_04280  binding-protein-dependent transport systems inner membrane component  48.84 
 
 
302 aa  264  1e-69  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2846  binding-protein-dependent transport systems inner membrane component  48.04 
 
 
313 aa  246  4e-64  Serratia proteamaculans 568  Bacteria  normal  0.149421  normal  0.0970123 
 
 
-
 
NC_012669  Bcav_0555  binding-protein-dependent transport systems inner membrane component  40.44 
 
 
328 aa  234  2.0000000000000002e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.913769 
 
 
-
 
NC_013093  Amir_1786  binding-protein-dependent transport systems inner membrane component  40.75 
 
 
335 aa  223  4.9999999999999996e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0186858  n/a   
 
 
-
 
NC_013526  Tter_2645  binding-protein-dependent transport systems inner membrane component  44.48 
 
 
311 aa  221  1.9999999999999999e-56  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  39.55 
 
 
316 aa  216  2.9999999999999998e-55  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_013172  Bfae_19290  carbohydrate ABC transporter membrane protein  41.67 
 
 
328 aa  214  9.999999999999999e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0926617  n/a   
 
 
-
 
NC_009767  Rcas_1880  binding-protein-dependent transport systems inner membrane component  40.19 
 
 
316 aa  210  3e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.2607 
 
 
-
 
NC_013510  Tcur_1735  binding-protein-dependent transport systems inner membrane component  40.88 
 
 
328 aa  203  3e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.152171  n/a   
 
 
-
 
NC_009380  Strop_1558  binding-protein-dependent transport systems inner membrane component  42.28 
 
 
322 aa  202  5e-51  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal  0.637369 
 
 
-
 
NC_014151  Cfla_2400  binding-protein-dependent transport systems inner membrane component  40.26 
 
 
338 aa  201  9.999999999999999e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00254991 
 
 
-
 
NC_013521  Sked_08410  carbohydrate ABC transporter membrane protein  41.03 
 
 
379 aa  200  3e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.166742 
 
 
-
 
NC_007333  Tfu_0935  multiple sugar transport system permease protein  37.86 
 
 
328 aa  199  5e-50  Thermobifida fusca YX  Bacteria  normal  0.36894  n/a   
 
 
-
 
NC_009953  Sare_1507  binding-protein-dependent transport systems inner membrane component  41.08 
 
 
323 aa  199  7e-50  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000203032 
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
316 aa  198  9e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_008578  Acel_0131  binding-protein-dependent transport systems inner membrane component  39 
 
 
320 aa  194  2e-48  Acidothermus cellulolyticus 11B  Bacteria  normal  0.495335  normal 
 
 
-
 
NC_013131  Caci_5331  binding-protein-dependent transport systems inner membrane component  37.95 
 
 
324 aa  192  6e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.455385  normal  0.753701 
 
 
-
 
NC_013595  Sros_3307  sugar transport system (permease)  39.02 
 
 
325 aa  191  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.175437 
 
 
-
 
NC_013530  Xcel_2612  binding-protein-dependent transport systems inner membrane component  37.11 
 
 
365 aa  183  4.0000000000000006e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6281  binding-protein-dependent transport systems inner membrane component  37.82 
 
 
309 aa  182  6e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1881  binding-protein-dependent transport systems inner membrane component  39.81 
 
 
334 aa  180  2.9999999999999997e-44  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.804974 
 
 
-
 
NC_012669  Bcav_2838  binding-protein-dependent transport systems inner membrane component  38.87 
 
 
346 aa  179  4e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.073402  normal 
 
 
-
 
NC_013526  Tter_2024  binding-protein-dependent transport systems inner membrane component  39.08 
 
 
303 aa  178  9e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000249122  n/a   
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  38.49 
 
 
315 aa  175  9.999999999999999e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  36.33 
 
 
311 aa  174  1.9999999999999998e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_011898  Ccel_2111  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
306 aa  172  5.999999999999999e-42  Clostridium cellulolyticum H10  Bacteria  normal  0.157384  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
305 aa  171  2e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0392  binding-protein-dependent transport systems inner membrane component  38.64 
 
 
328 aa  171  2e-41  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  37.01 
 
 
306 aa  166  2.9999999999999998e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0400  binding-protein-dependent transport systems inner membrane component  37.59 
 
 
331 aa  166  4e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  35.17 
 
 
321 aa  166  6.9999999999999995e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7172  sugar transport system (permease)  37.92 
 
 
323 aa  165  8e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0377247 
 
 
-
 
NC_014165  Tbis_0841  binding-protein-dependent transporter inner membrane component  33.13 
 
 
337 aa  165  1.0000000000000001e-39  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.203798 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
306 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  33.66 
 
 
298 aa  162  5.0000000000000005e-39  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  38.18 
 
 
309 aa  162  5.0000000000000005e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5460  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
334 aa  162  1e-38  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
317 aa  160  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012028  Hlac_2863  binding-protein-dependent transport systems inner membrane component  37.24 
 
 
356 aa  160  2e-38  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
291 aa  161  2e-38  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_009664  Krad_3963  binding-protein-dependent transport systems inner membrane component  38.71 
 
 
326 aa  158  1e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0380307  normal  0.973635 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
299 aa  157  2e-37  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  35.05 
 
 
301 aa  157  3e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
295 aa  157  3e-37  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
300 aa  157  3e-37  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0827  binding-protein-dependent transport systems inner membrane component  35.99 
 
 
299 aa  157  3e-37  Petrotoga mobilis SJ95  Bacteria  normal  0.175132  n/a   
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
296 aa  156  5.0000000000000005e-37  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
353 aa  156  6e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
295 aa  155  7e-37  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
320 aa  155  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
297 aa  154  1e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
309 aa  153  2.9999999999999998e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
305 aa  152  5e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  36.91 
 
 
307 aa  152  5.9999999999999996e-36  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  36.91 
 
 
307 aa  152  5.9999999999999996e-36  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
308 aa  152  7e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  36.03 
 
 
293 aa  152  8e-36  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
307 aa  151  1e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
316 aa  150  2e-35  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  34.03 
 
 
293 aa  151  2e-35  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
316 aa  150  3e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  31.83 
 
 
294 aa  150  4e-35  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
318 aa  149  4e-35  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013946  Mrub_2809  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
279 aa  149  4e-35  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.232459 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
313 aa  149  5e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0409  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
300 aa  149  7e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  34.92 
 
 
306 aa  149  9e-35  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
321 aa  148  9e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  36 
 
 
320 aa  148  1.0000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  32.04 
 
 
300 aa  148  1.0000000000000001e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  35.31 
 
 
311 aa  148  1.0000000000000001e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
313 aa  148  1.0000000000000001e-34  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
325 aa  147  2.0000000000000003e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  34.97 
 
 
309 aa  147  2.0000000000000003e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  33.66 
 
 
309 aa  147  3e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  32.69 
 
 
311 aa  147  3e-34  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
308 aa  147  3e-34  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  32.3 
 
 
287 aa  146  4.0000000000000006e-34  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  32.91 
 
 
306 aa  146  4.0000000000000006e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  36.72 
 
 
294 aa  146  4.0000000000000006e-34  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
307 aa  145  7.0000000000000006e-34  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
292 aa  145  7.0000000000000006e-34  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2273  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
302 aa  145  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
294 aa  145  1e-33  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1892  binding-protein-dependent transporter inner membrane component  38.46 
 
 
323 aa  145  1e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.254377 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
296 aa  144  2e-33  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0914  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
310 aa  144  2e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  31.89 
 
 
310 aa  143  3e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_012669  Bcav_1516  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
315 aa  143  3e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0640497  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  29.87 
 
 
308 aa  144  3e-33  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
317 aa  143  4e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  35.35 
 
 
310 aa  143  4e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0204  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
299 aa  142  6e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.497209  normal  0.169553 
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  36.58 
 
 
293 aa  142  7e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_011898  Ccel_0201  binding-protein-dependent transport systems inner membrane component  31 
 
 
294 aa  142  7e-33  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  34.46 
 
 
305 aa  142  9e-33  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
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