Gene VIBHAR_06940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06940 
Symbol 
ID5556774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp2035807 
End bp2036796 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content48% 
IMG OID640911408 
Producthypothetical protein 
Protein accessionYP_001449041 
Protein GI156978135 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCATG CAGCGAGCAA GGTTATGGAA ACTCCAGAAA GTAAGGGCAC TTTTTCTCGT 
CTGAATTTGA AAGCGCTTAC ACCTTATGGA TTCCTATTGC CGTTTTTGAT CATCTTTTCA
GTGTTCGGAA TTTTTCCGTT GCTGTTTTCT ATTTTTCTTT CTTTTCATGA GTGGAACCCA
GTCGAGGGTT TGGGCGCTAT GGACTATGTG GGGTTCGAAA ACTACCACAT TGCACTGACA
GACCCGTGGC TGTGGCGCTC ATTGAAGAAC ACGCTTTGGC TAGCGATCAC ATCAGGCGTG
GCTCAACACT TAGTTGCCTT ACCTGTGGCG TACATCTTGG TGTCGCTGGG TGACCGTTTC
CGTCATTGGT TGACGTCGGC TTACTTTCTA CCGTTCATCA CATCTACGGT GGCAGCGTCG
CTTATCTTCT TCAATATGTA CTCACCAAAC TCGGGCATCA TCAACCAAAG CTTGATGGCA
CTGGCAGACA GTACCTTGTT TGGTTGGGCA TTCTCTTGGG TGAACGACTT CCAGCCAATC
CGTTGGTTAG ATGACGCGAC CATGGTTAAG CCTTCCATCG CCATCATGGT GTTCTGGAAA
TACACCGGTT TCAACATCGT GCTTTACACC ACTGGCTTGA TGACGATTCC GAGAGACATC
CTAGAAGCGG CTCGTATGGA CGGCGCAAAC GCATGGCGTC GATTCTGGAG CATTTCACTA
CCAATGATTC GTCCATTCAT CTTCTTTGCG GTCACCATGA CCATCATCGG TAACTTGCAG
TTGTTCGAAG AACCATTTGT TCTGACGCGC GGTACTGGTG GTACGGGTCA GTCTGGCTTA
ACCATCTCTA TGTACCTCTA CAAAGTGGGT TGGGAATGGT TAGAAATGGG TACAGCGTCA
GCAATTTCAT GTCTGCTCTT TACCTTGATT GCAGGCTGTA CAGCGGTTCA ATTCTTCTTC
TTCGGTAAGA AAGGTCTAGG GGAGCAATAA
 
Protein sequence
MNHAASKVME TPESKGTFSR LNLKALTPYG FLLPFLIIFS VFGIFPLLFS IFLSFHEWNP 
VEGLGAMDYV GFENYHIALT DPWLWRSLKN TLWLAITSGV AQHLVALPVA YILVSLGDRF
RHWLTSAYFL PFITSTVAAS LIFFNMYSPN SGIINQSLMA LADSTLFGWA FSWVNDFQPI
RWLDDATMVK PSIAIMVFWK YTGFNIVLYT TGLMTIPRDI LEAARMDGAN AWRRFWSISL
PMIRPFIFFA VTMTIIGNLQ LFEEPFVLTR GTGGTGQSGL TISMYLYKVG WEWLEMGTAS
AISCLLFTLI AGCTAVQFFF FGKKGLGEQ