More than 300 homologs were found in PanDaTox collection
for query gene Jden_1881 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_1881  binding-protein-dependent transport systems inner membrane component  100 
 
 
334 aa  670    Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.804974 
 
 
-
 
NC_013521  Sked_08410  carbohydrate ABC transporter membrane protein  74.61 
 
 
379 aa  496  1e-139  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.166742 
 
 
-
 
NC_014151  Cfla_2400  binding-protein-dependent transport systems inner membrane component  69.25 
 
 
338 aa  471  1e-132  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00254991 
 
 
-
 
NC_012669  Bcav_2838  binding-protein-dependent transport systems inner membrane component  72.73 
 
 
346 aa  457  9.999999999999999e-129  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.073402  normal 
 
 
-
 
NC_011886  Achl_0400  binding-protein-dependent transport systems inner membrane component  70.72 
 
 
331 aa  419  1e-116  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_1786  binding-protein-dependent transport systems inner membrane component  53.87 
 
 
335 aa  339  4e-92  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0186858  n/a   
 
 
-
 
NC_013530  Xcel_2612  binding-protein-dependent transport systems inner membrane component  50.78 
 
 
365 aa  334  1e-90  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0392  binding-protein-dependent transport systems inner membrane component  51.33 
 
 
328 aa  285  5e-76  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_007333  Tfu_0935  multiple sugar transport system permease protein  47.2 
 
 
328 aa  278  7e-74  Thermobifida fusca YX  Bacteria  normal  0.36894  n/a   
 
 
-
 
NC_013595  Sros_7172  sugar transport system (permease)  48.08 
 
 
323 aa  268  1e-70  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0377247 
 
 
-
 
NC_013595  Sros_3307  sugar transport system (permease)  43.48 
 
 
325 aa  268  1e-70  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.175437 
 
 
-
 
NC_014165  Tbis_0841  binding-protein-dependent transporter inner membrane component  45.12 
 
 
337 aa  266  4e-70  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.203798 
 
 
-
 
NC_013510  Tcur_1735  binding-protein-dependent transport systems inner membrane component  45.14 
 
 
328 aa  263  4e-69  Thermomonospora curvata DSM 43183  Bacteria  normal  0.152171  n/a   
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  47.46 
 
 
316 aa  262  4.999999999999999e-69  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_009380  Strop_1558  binding-protein-dependent transport systems inner membrane component  49.35 
 
 
322 aa  258  7e-68  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal  0.637369 
 
 
-
 
NC_009953  Sare_1507  binding-protein-dependent transport systems inner membrane component  48.47 
 
 
323 aa  253  4.0000000000000004e-66  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000203032 
 
 
-
 
NC_013131  Caci_5331  binding-protein-dependent transport systems inner membrane component  42.71 
 
 
324 aa  249  4e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.455385  normal  0.753701 
 
 
-
 
NC_008578  Acel_0131  binding-protein-dependent transport systems inner membrane component  46.13 
 
 
320 aa  243  3e-63  Acidothermus cellulolyticus 11B  Bacteria  normal  0.495335  normal 
 
 
-
 
NC_013947  Snas_6281  binding-protein-dependent transport systems inner membrane component  43.55 
 
 
309 aa  234  1.0000000000000001e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5460  binding-protein-dependent transport systems inner membrane component  46.24 
 
 
334 aa  230  3e-59  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1892  binding-protein-dependent transporter inner membrane component  45.58 
 
 
323 aa  225  7e-58  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.254377 
 
 
-
 
NC_013172  Bfae_19290  carbohydrate ABC transporter membrane protein  41.58 
 
 
328 aa  220  3e-56  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0926617  n/a   
 
 
-
 
NC_013526  Tter_2645  binding-protein-dependent transport systems inner membrane component  40.82 
 
 
311 aa  215  9e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3963  binding-protein-dependent transport systems inner membrane component  41.21 
 
 
326 aa  209  4e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0380307  normal  0.973635 
 
 
-
 
NC_012669  Bcav_0555  binding-protein-dependent transport systems inner membrane component  40.54 
 
 
328 aa  203  4e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.913769 
 
 
-
 
NC_007908  Rfer_1100  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
311 aa  191  1e-47  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.0016702  n/a   
 
 
-
 
NC_008010  Dgeo_2860  binding-protein-dependent transport systems inner membrane component  39.81 
 
 
322 aa  188  1e-46  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.396467  n/a   
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  36.39 
 
 
316 aa  186  5e-46  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_011899  Hore_04280  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
302 aa  186  6e-46  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0285  binding-protein-dependent transport systems inner membrane component  35.98 
 
 
327 aa  184  2.0000000000000003e-45  Meiothermus ruber DSM 1279  Bacteria  normal  0.0175684  normal  0.996665 
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  37.36 
 
 
315 aa  180  2e-44  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_009784  VIBHAR_06940  hypothetical protein  32.93 
 
 
329 aa  176  5e-43  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_1880  binding-protein-dependent transport systems inner membrane component  37.83 
 
 
316 aa  176  6e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.2607 
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
298 aa  173  3.9999999999999995e-42  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  36 
 
 
311 aa  168  1e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_011898  Ccel_2111  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
306 aa  166  5.9999999999999996e-40  Clostridium cellulolyticum H10  Bacteria  normal  0.157384  n/a   
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  35.92 
 
 
306 aa  166  6.9999999999999995e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
308 aa  162  1e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
297 aa  160  2e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_009832  Spro_2846  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
313 aa  160  3e-38  Serratia proteamaculans 568  Bacteria  normal  0.149421  normal  0.0970123 
 
 
-
 
NC_010003  Pmob_0827  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
299 aa  159  9e-38  Petrotoga mobilis SJ95  Bacteria  normal  0.175132  n/a   
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  30.56 
 
 
318 aa  158  1e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  32.27 
 
 
322 aa  156  5.0000000000000005e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
318 aa  155  7e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_012028  Hlac_2863  binding-protein-dependent transport systems inner membrane component  33.54 
 
 
356 aa  154  2e-36  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
311 aa  154  2e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
295 aa  152  7e-36  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
306 aa  152  8e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  34.5 
 
 
318 aa  152  8e-36  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  37.8 
 
 
311 aa  151  1e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011661  Dtur_0507  binding-protein-dependent transport systems inner membrane component  35.61 
 
 
299 aa  151  2e-35  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000030377  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
306 aa  148  1.0000000000000001e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  34.55 
 
 
301 aa  147  3e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
299 aa  147  4.0000000000000006e-34  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
309 aa  146  5e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_011371  Rleg2_6525  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
286 aa  146  5e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.728774  normal  0.302995 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  33.1 
 
 
315 aa  145  6e-34  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
313 aa  146  6e-34  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_012852  Rleg_6113  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
286 aa  145  6e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.453278  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
309 aa  145  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2024  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
303 aa  145  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000249122  n/a   
 
 
-
 
NC_013421  Pecwa_0973  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
293 aa  145  1e-33  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
307 aa  144  2e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_012917  PC1_0737  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
293 aa  143  3e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  34.71 
 
 
317 aa  143  4e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  32.4 
 
 
300 aa  143  4e-33  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
325 aa  142  9e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  33.66 
 
 
305 aa  141  9.999999999999999e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1516  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
315 aa  141  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0640497  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  30.86 
 
 
321 aa  142  9.999999999999999e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
308 aa  141  1.9999999999999998e-32  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
309 aa  140  1.9999999999999998e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3522  binding-protein-dependent transport systems inner membrane component  31.73 
 
 
331 aa  141  1.9999999999999998e-32  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3671  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
332 aa  140  3e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
314 aa  140  3e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
420 aa  140  3.9999999999999997e-32  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  35.15 
 
 
420 aa  139  6e-32  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2572  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
278 aa  139  6e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  0.264075  n/a   
 
 
-
 
NC_013131  Caci_7905  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
336 aa  139  7e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
301 aa  138  2e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  35.21 
 
 
292 aa  137  2e-31  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1094  binding-protein-dependent transport systems inner membrane component  33.78 
 
 
307 aa  137  2e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0796  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
312 aa  138  2e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.633875  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
283 aa  137  3.0000000000000003e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2809  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
279 aa  137  3.0000000000000003e-31  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.232459 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
305 aa  137  3.0000000000000003e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  34.3 
 
 
321 aa  135  9.999999999999999e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_012912  Dd1591_0663  binding-protein-dependent transport systems inner membrane component  30.92 
 
 
333 aa  135  9.999999999999999e-31  Dickeya zeae Ech1591  Bacteria  normal  0.440104  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
300 aa  135  9.999999999999999e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  39.82 
 
 
292 aa  134  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
316 aa  134  1.9999999999999998e-30  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  35.43 
 
 
299 aa  134  1.9999999999999998e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_0102  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
310 aa  134  1.9999999999999998e-30  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0186923 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
299 aa  134  1.9999999999999998e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  31.2 
 
 
291 aa  134  1.9999999999999998e-30  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013521  Sked_06580  carbohydrate ABC transporter membrane protein  33.12 
 
 
318 aa  134  1.9999999999999998e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
321 aa  133  3e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  31.93 
 
 
300 aa  134  3e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_3589  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
294 aa  133  3.9999999999999996e-30  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00013616  n/a   
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  30.27 
 
 
310 aa  133  3.9999999999999996e-30  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
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