Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3589 |
Symbol | |
ID | 5742614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4433555 |
End bp | 4434439 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641294701 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001560677 |
Protein GI | 160881709 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00013616 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAATAC GCTTACCCTT GGAAAAAAGA AGAAAGCTAG TTAGTTGGTT ATTCCTATTA CCTGCTACAC TTTTGATTGC TGGTATGAGT TTCTATCCGA TGATAAAAGC TTTTCTTCTA TCCTTTACAA AAGGATTTGG AAAGACAAGT GAATTTGTTG GAACCTATAA TTATCAAAGG TTATTTCAAG ATTCCCTATT TAAGACAGCA CTTGGGAACA CCTTTATTTA TCTAATTATA CAGGTACCAT TGATGCTTAT CTTAGCATTA ATTTTAGCTT CTTTATTAAA CAACCCTAAG ATAAAATGTA AAGGATTATT TCGAACAATG ATCTTCTTAC CATGTGCAAC ATCCTTGGTA TCGTATTCCA TTATATTTCG ATCTATGTTT GCACTCGATG GTTTTGCAAA CTCAGTATTA ATGAATTTAA ACGTCATCAA TAAACCGATT AATTGGATTG GTGAAATCTG GCCGGCGAGG ATCATAATTA TACTTGCAAT TACCTGGAGA TGGACTGGAT ACAATATGAT TTTCTATTTA TCAGGCCTAC AAAATATTGA CCCACAGATC TATGAGTCTG CTAAAATTGA TGGTGCTAGT GCATCACAAC AATTTCGAAA GATTACTATT CCGTTATTAA AGCCCATTAT TTTATTGACT GCAATTATGT CAACCAATGG AACGCTTCAG TTATTTGATG AAACGAAGAA TTTAACCAAT GGTGGGCCAG CCAATATGAC AATTTCTATT TCTCAGTACA TATATAAATT ATCGTTTGAA TATTCTCCGC AGTTTGGGTA TGCAGCAACC ATATCCTTTA TCGTATTTTT ATTGGTTGCA GTTCTCTCAT TCCTTCAGAT GAAAGTAGGT GATAAACGTG ACTAA
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Protein sequence | MKIRLPLEKR RKLVSWLFLL PATLLIAGMS FYPMIKAFLL SFTKGFGKTS EFVGTYNYQR LFQDSLFKTA LGNTFIYLII QVPLMLILAL ILASLLNNPK IKCKGLFRTM IFLPCATSLV SYSIIFRSMF ALDGFANSVL MNLNVINKPI NWIGEIWPAR IIIILAITWR WTGYNMIFYL SGLQNIDPQI YESAKIDGAS ASQQFRKITI PLLKPIILLT AIMSTNGTLQ LFDETKNLTN GGPANMTISI SQYIYKLSFE YSPQFGYAAT ISFIVFLLVA VLSFLQMKVG DKRD
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