Gene Cphy_3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3589 
Symbol 
ID5742614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4433555 
End bp4434439 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content34% 
IMG OID641294701 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001560677 
Protein GI160881709 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00013616 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAATAC GCTTACCCTT GGAAAAAAGA AGAAAGCTAG TTAGTTGGTT ATTCCTATTA 
CCTGCTACAC TTTTGATTGC TGGTATGAGT TTCTATCCGA TGATAAAAGC TTTTCTTCTA
TCCTTTACAA AAGGATTTGG AAAGACAAGT GAATTTGTTG GAACCTATAA TTATCAAAGG
TTATTTCAAG ATTCCCTATT TAAGACAGCA CTTGGGAACA CCTTTATTTA TCTAATTATA
CAGGTACCAT TGATGCTTAT CTTAGCATTA ATTTTAGCTT CTTTATTAAA CAACCCTAAG
ATAAAATGTA AAGGATTATT TCGAACAATG ATCTTCTTAC CATGTGCAAC ATCCTTGGTA
TCGTATTCCA TTATATTTCG ATCTATGTTT GCACTCGATG GTTTTGCAAA CTCAGTATTA
ATGAATTTAA ACGTCATCAA TAAACCGATT AATTGGATTG GTGAAATCTG GCCGGCGAGG
ATCATAATTA TACTTGCAAT TACCTGGAGA TGGACTGGAT ACAATATGAT TTTCTATTTA
TCAGGCCTAC AAAATATTGA CCCACAGATC TATGAGTCTG CTAAAATTGA TGGTGCTAGT
GCATCACAAC AATTTCGAAA GATTACTATT CCGTTATTAA AGCCCATTAT TTTATTGACT
GCAATTATGT CAACCAATGG AACGCTTCAG TTATTTGATG AAACGAAGAA TTTAACCAAT
GGTGGGCCAG CCAATATGAC AATTTCTATT TCTCAGTACA TATATAAATT ATCGTTTGAA
TATTCTCCGC AGTTTGGGTA TGCAGCAACC ATATCCTTTA TCGTATTTTT ATTGGTTGCA
GTTCTCTCAT TCCTTCAGAT GAAAGTAGGT GATAAACGTG ACTAA
 
Protein sequence
MKIRLPLEKR RKLVSWLFLL PATLLIAGMS FYPMIKAFLL SFTKGFGKTS EFVGTYNYQR 
LFQDSLFKTA LGNTFIYLII QVPLMLILAL ILASLLNNPK IKCKGLFRTM IFLPCATSLV
SYSIIFRSMF ALDGFANSVL MNLNVINKPI NWIGEIWPAR IIIILAITWR WTGYNMIFYL
SGLQNIDPQI YESAKIDGAS ASQQFRKITI PLLKPIILLT AIMSTNGTLQ LFDETKNLTN
GGPANMTISI SQYIYKLSFE YSPQFGYAAT ISFIVFLLVA VLSFLQMKVG DKRD