| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0131 |
|---|
| Symbol | |
|---|
| ID | 4484619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 134026 |
|---|
| End bp | 134988 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639728893 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_871892 |
|---|
| Protein GI | 117927341 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.495335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCG TGCACGAGAC TCACTCAATT TCTACTGTGC CGACCTCCTC TCCACGCCGC
CGTCTTCGTC CACGGATCGC CCTGATCGGG TCGAAGGCCG CCTACGTCTA TGTAGCGCCG
TTCTTCATCC TCTTTGCTGT CTTCGGCTTG TACCCACTGA TCTACACCGG GTGGGTCTCG
CTGCACGACG TCAGCCTGCT CAACATCAAC AAGATGACGT GGGTGGGCTT CAAGAATTAC
ACGTCTCTCT GGCACAACCA CTTCTTCCTG AACGCGCTCG GCAACACCAT CACCATTGGC
ATCATTTCCG CCGTTCCGCA ATTGCTGGCC GCATTGGGCA TTGCGCACTT GCTGAATTAC
CGCATGCGGG GATCCCTGAT GTTCCGCATC GCAATGCTCA TGCCTTACGC AACCTCGGTC
GTCGCCACGA CGCTCATCTT CAGCCAGCTC TTTGCCCGTG ACACCGGGTT CATCAACTGG
TTCCTCGGCC TCTTTGGCGT CAGTCCCATT AACTGGAACA ACGGCCCGAA ATATCTCTCC
CAGCTTGCGG TCTCGACGAT GGTCATGTGG CGGTGGACGG GATACAACGC TTTGATCTAT
CTCGCCGGCA TGCAGGCCAT TCCATACGAG CTGTATGAAG CGGCCGCCAT CGACGGAGCC
AACCGGTGGC AGCAATTCAT GAAGATCACA ATTCCGTCGC TGCGGCCGAC GATCCTCTTC
ACCGTTGTGG TCTCCACGAT CGGGTCGATG CAGTTGTTCG CCGAACCGTA CCTGTTCAGC
AACAACACCA ACGGTGGCGG CAGCGGTCAG TACCAGACGC TGACGCTCTT CCTCTACCAG
CAAGGCTGGC AGTACAACCA CCTCGGTTAT GCCGCAGCCG TGGCGTGGAC GATGCTGGCA
ATCATCGTCG TCCTCGTCCT TATCAATGCG GGCTTGACCA ACCTGCGGGC GCGGAAAGGT
TAG
|
|---|
| Protein sequence | MTAVHETHSI STVPTSSPRR RLRPRIALIG SKAAYVYVAP FFILFAVFGL YPLIYTGWVS
LHDVSLLNIN KMTWVGFKNY TSLWHNHFFL NALGNTITIG IISAVPQLLA ALGIAHLLNY
RMRGSLMFRI AMLMPYATSV VATTLIFSQL FARDTGFINW FLGLFGVSPI NWNNGPKYLS
QLAVSTMVMW RWTGYNALIY LAGMQAIPYE LYEAAAIDGA NRWQQFMKIT IPSLRPTILF
TVVVSTIGSM QLFAEPYLFS NNTNGGGSGQ YQTLTLFLYQ QGWQYNHLGY AAAVAWTMLA
IIVVLVLINA GLTNLRARKG
|
|---|
| |