Gene Sros_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3307 
Symbol 
ID8666595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3601808 
End bp3602785 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID 
Productsugar transport system (permease) 
Protein accessionYP_003338989 
Protein GI271964793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.175437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC ACGTCGACAC TCCGGCTCCG GCCCGGCCAG GCCCCCGCCG GCCGTCCGGG 
CACCGGGGCT CGGGAAGGGG CGGCGGCGGA CTCGCCAGGT TCGACCTCCG GGCGACTCCC
TACTTCCTCG TCTCCCCCTA CTTCCTGCTC TTCGCCGTCT TCGGCGTCTT CCCGCTCGGC
TACACCCTCT GGGTGTCGCT GCACGACTGG GAGCTCGCCG GGGACAAGAC CTTCGTCGGG
ATCGACAACT ACGTCTCCCT GATCACCGAC GAGGCCTTCT GGAACGCGGT GATCAACACG
CTCGGCATGT TCGTCATGTC GACGGTCCCG CAGCTCGTCC TCGCCCTGAT CCTCGCCAAC
GCGCTCAACA AGCGCATCCG GGGCCGGCTC TTCTTCCGCC TCGGCGTGCT GCTGCCGCTG
ATCACCTCCG TCGTCGCCGT CGCCGTCGTC TTCACCCAGC TCTACGGGCG CGACTACGGA
ATGATCAACT GGTTCCTCGG CCTCTTCGGC GTCGACGCGA TCAACTGGCA GAACGAGAAG
TGGTCCTCGT GGATCGCGAT CTCCACGATG ATCGACTGGC GCTGGACCGG CTACAACGCG
ATCATCCTGC TCGCCGCCAT GCAGACCATC CCCAAGGACC TCTACGAGGC CGCGGCCATC
GACGGCGCCA CGGCGCGGCG GCAGTTCTGG CAGATCACCA TCCCGATGCT GCGCCCGACG
ATCATCTTCA CGGTGTTCAT CTCGACCATC GGCGGCCTGA CGCTGTTCAC CGAACCGGTC
ATGTTCGACG GCAACCCGAC GATGGCCGGC GGTGCCACCG GCCAGTACCA GACCGTGGCG
ATGTTCATCG TCAAGGAGGC GTTCCGCGAC TTCGACTTCG GCTACGCCTC GGCCGCCGCC
TGGCTGCTGT TCGCGCTGAT CCTCATCGGC ACGCTCATCA ACTACTCCTT CACCCGCCGT
ATCGGGGGTT CCAAGTGA
 
Protein sequence
MTLHVDTPAP ARPGPRRPSG HRGSGRGGGG LARFDLRATP YFLVSPYFLL FAVFGVFPLG 
YTLWVSLHDW ELAGDKTFVG IDNYVSLITD EAFWNAVINT LGMFVMSTVP QLVLALILAN
ALNKRIRGRL FFRLGVLLPL ITSVVAVAVV FTQLYGRDYG MINWFLGLFG VDAINWQNEK
WSSWIAISTM IDWRWTGYNA IILLAAMQTI PKDLYEAAAI DGATARRQFW QITIPMLRPT
IIFTVFISTI GGLTLFTEPV MFDGNPTMAG GATGQYQTVA MFIVKEAFRD FDFGYASAAA
WLLFALILIG TLINYSFTRR IGGSK