More than 300 homologs were found in PanDaTox collection
for query gene Tbis_1892 on replicon NC_014165
Organism: Thermobispora bispora DSM 43833



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014165  Tbis_1892  binding-protein-dependent transporter inner membrane component  100 
 
 
323 aa  649    Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.254377 
 
 
-
 
NC_013595  Sros_3307  sugar transport system (permease)  63.53 
 
 
325 aa  417  9.999999999999999e-116  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.175437 
 
 
-
 
NC_013510  Tcur_1735  binding-protein-dependent transport systems inner membrane component  59.27 
 
 
328 aa  355  5e-97  Thermomonospora curvata DSM 43183  Bacteria  normal  0.152171  n/a   
 
 
-
 
NC_007333  Tfu_0935  multiple sugar transport system permease protein  54.4 
 
 
328 aa  341  1e-92  Thermobifida fusca YX  Bacteria  normal  0.36894  n/a   
 
 
-
 
NC_013947  Snas_6281  binding-protein-dependent transport systems inner membrane component  60 
 
 
309 aa  337  9.999999999999999e-92  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0392  binding-protein-dependent transport systems inner membrane component  53.44 
 
 
328 aa  308  1.0000000000000001e-82  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_013093  Amir_1786  binding-protein-dependent transport systems inner membrane component  49.68 
 
 
335 aa  307  2.0000000000000002e-82  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0186858  n/a   
 
 
-
 
NC_009380  Strop_1558  binding-protein-dependent transport systems inner membrane component  55.41 
 
 
322 aa  298  7e-80  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal  0.637369 
 
 
-
 
NC_013595  Sros_7172  sugar transport system (permease)  53.45 
 
 
323 aa  292  5e-78  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0377247 
 
 
-
 
NC_009953  Sare_1507  binding-protein-dependent transport systems inner membrane component  53.36 
 
 
323 aa  290  3e-77  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000203032 
 
 
-
 
NC_014165  Tbis_0841  binding-protein-dependent transporter inner membrane component  50.77 
 
 
337 aa  288  6e-77  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.203798 
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  46.96 
 
 
316 aa  288  9e-77  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_013521  Sked_08410  carbohydrate ABC transporter membrane protein  48.9 
 
 
379 aa  284  1.0000000000000001e-75  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.166742 
 
 
-
 
NC_013131  Caci_5331  binding-protein-dependent transport systems inner membrane component  50.69 
 
 
324 aa  283  3.0000000000000004e-75  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.455385  normal  0.753701 
 
 
-
 
NC_014151  Cfla_2400  binding-protein-dependent transport systems inner membrane component  46.62 
 
 
338 aa  281  1e-74  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00254991 
 
 
-
 
NC_009921  Franean1_5460  binding-protein-dependent transport systems inner membrane component  48.9 
 
 
334 aa  278  1e-73  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0131  binding-protein-dependent transport systems inner membrane component  50.71 
 
 
320 aa  275  7e-73  Acidothermus cellulolyticus 11B  Bacteria  normal  0.495335  normal 
 
 
-
 
NC_011886  Achl_0400  binding-protein-dependent transport systems inner membrane component  46.27 
 
 
331 aa  271  2e-71  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_2838  binding-protein-dependent transport systems inner membrane component  46.38 
 
 
346 aa  265  1e-69  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.073402  normal 
 
 
-
 
NC_013530  Xcel_2612  binding-protein-dependent transport systems inner membrane component  42.99 
 
 
365 aa  256  4e-67  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1881  binding-protein-dependent transport systems inner membrane component  45.57 
 
 
334 aa  254  2.0000000000000002e-66  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.804974 
 
 
-
 
NC_012669  Bcav_0555  binding-protein-dependent transport systems inner membrane component  43.04 
 
 
328 aa  241  1e-62  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.913769 
 
 
-
 
NC_009664  Krad_3963  binding-protein-dependent transport systems inner membrane component  46.2 
 
 
326 aa  238  8e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0380307  normal  0.973635 
 
 
-
 
NC_013172  Bfae_19290  carbohydrate ABC transporter membrane protein  44.8 
 
 
328 aa  236  3e-61  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0926617  n/a   
 
 
-
 
NC_013526  Tter_2645  binding-protein-dependent transport systems inner membrane component  41.88 
 
 
311 aa  229  4e-59  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  41.12 
 
 
316 aa  219  5e-56  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_009767  Rcas_1880  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
316 aa  209  4e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.2607 
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  42.32 
 
 
297 aa  192  5e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_011899  Hore_04280  binding-protein-dependent transport systems inner membrane component  39.6 
 
 
302 aa  192  5e-48  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  39.93 
 
 
306 aa  190  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2860  binding-protein-dependent transport systems inner membrane component  36.96 
 
 
322 aa  187  2e-46  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.396467  n/a   
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  36.65 
 
 
315 aa  184  1.0000000000000001e-45  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  37.38 
 
 
308 aa  184  2.0000000000000003e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_013946  Mrub_0285  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
327 aa  183  3e-45  Meiothermus ruber DSM 1279  Bacteria  normal  0.0175684  normal  0.996665 
 
 
-
 
NC_007908  Rfer_1100  binding-protein-dependent transport systems inner membrane component  37.58 
 
 
311 aa  182  5.0000000000000004e-45  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.0016702  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
295 aa  174  9.999999999999999e-43  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
298 aa  172  6.999999999999999e-42  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2024  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
303 aa  172  9e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000249122  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
313 aa  169  5e-41  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
300 aa  169  5e-41  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
305 aa  169  7e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  38.55 
 
 
291 aa  169  8e-41  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
310 aa  168  1e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_011661  Dtur_0507  binding-protein-dependent transport systems inner membrane component  40.36 
 
 
299 aa  166  4e-40  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000030377  n/a   
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  38.87 
 
 
311 aa  166  4e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012028  Hlac_2863  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
356 aa  166  5.9999999999999996e-40  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  34.78 
 
 
311 aa  166  5.9999999999999996e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_009784  VIBHAR_06940  hypothetical protein  32.39 
 
 
329 aa  166  5.9999999999999996e-40  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
309 aa  165  8e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  35.55 
 
 
321 aa  164  1.0000000000000001e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
325 aa  165  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  33.64 
 
 
313 aa  164  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  36.52 
 
 
306 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2809  binding-protein-dependent transport systems inner membrane component  39.37 
 
 
279 aa  164  2.0000000000000002e-39  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.232459 
 
 
-
 
NC_011898  Ccel_2111  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
306 aa  163  4.0000000000000004e-39  Clostridium cellulolyticum H10  Bacteria  normal  0.157384  n/a   
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
300 aa  162  5.0000000000000005e-39  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
300 aa  162  5.0000000000000005e-39  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0409  binding-protein-dependent transport systems inner membrane component  37.22 
 
 
300 aa  162  7e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  34.05 
 
 
300 aa  162  9e-39  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011371  Rleg2_6525  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
286 aa  161  1e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.728774  normal  0.302995 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  40.93 
 
 
299 aa  160  3e-38  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
309 aa  160  3e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012852  Rleg_6113  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
286 aa  160  4e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.453278  normal 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
321 aa  160  4e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  38.75 
 
 
287 aa  159  7e-38  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
293 aa  158  1e-37  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  32.13 
 
 
318 aa  157  2e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  31.09 
 
 
318 aa  157  3e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
306 aa  156  5.0000000000000005e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_010003  Pmob_0827  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
299 aa  156  5.0000000000000005e-37  Petrotoga mobilis SJ95  Bacteria  normal  0.175132  n/a   
 
 
-
 
NC_013421  Pecwa_0973  binding-protein-dependent transport systems inner membrane component  36.13 
 
 
293 aa  155  7e-37  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0737  binding-protein-dependent transport systems inner membrane component  36.13 
 
 
293 aa  155  8e-37  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
293 aa  155  9e-37  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
309 aa  155  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
420 aa  154  1e-36  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
316 aa  155  1e-36  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  37.25 
 
 
353 aa  154  2e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  36.77 
 
 
293 aa  154  2e-36  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  36.82 
 
 
294 aa  154  2.9999999999999998e-36  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0699  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
291 aa  153  2.9999999999999998e-36  Dickeya dadantii Ech703  Bacteria  normal  0.216687  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
300 aa  153  5e-36  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  32.05 
 
 
321 aa  152  5.9999999999999996e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1516  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
315 aa  152  7e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0640497  normal 
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
322 aa  152  8e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
314 aa  152  8.999999999999999e-36  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_011369  Rleg2_4016  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
319 aa  151  1e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
319 aa  152  1e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
307 aa  151  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
305 aa  150  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  39.59 
 
 
293 aa  150  3e-35  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  31.87 
 
 
317 aa  150  3e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  36.89 
 
 
420 aa  150  3e-35  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
319 aa  150  4e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.2 
 
 
317 aa  150  4e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
290 aa  150  4e-35  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  35.41 
 
 
318 aa  150  4e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  34.4 
 
 
314 aa  149  6e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  30.57 
 
 
315 aa  149  7e-35  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
283 aa  149  7e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
292 aa  149  8e-35  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>