| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5098 |
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| Symbol | |
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| ID | 8336452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5855295 |
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| End bp | 5856185 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644958197 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003115799 |
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| Protein GI | 256394235 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0579092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0820796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTC GTCGCCGGCG TCACACGCTG CTTCCACAGG CTCTGCTCCT CCCGGCCGTG
GCGTTGTTCC TGCTGTTCAC GGTCGCTCCG GGCGGCTACG CGATCTACCT GAGCTTCATG
AAGCAGAAAG CCGGCGGCGG CCTGTTCGGG ACCGACAACC CGACGACCGT CTTCGCCGGG
CTGGAGAACT ACCGCGCCGC GTTCGGCGAC GCGGAGTTCT GGCACAGCAT CGGCCGGATG
CTGCTGGTCG CCGTCGTCGG AGTGCCGGCG ACCATCATCT TGTCGACCAC GTTCGCGCTG
TGCCTGGACG CCAAGCGCGC CCGGCTCGTC GGGTTCTCGC GGCTGGCGAT CTTTCTGCCG
TACGCGGTGC CCGGCGTGGT CGCCACGCTG CTGTGGGGGT TCATGTACCT GCCGGCGACC
AGCCCGATCG GCGGGAACAC CGTGAACTAC TTCGGTTCGC ACATGGTGTT CTTCTCCGTG
GCCAACGTCG CGGTGTGGGG CGTGTTGGGC TTCAACATGG TCGTCATCTA CACCTCGCTG
CGCGGCCTGC CGCGCGAGCT GTTCCAGGCC GCCGAGCTGG ACGGCGCCAG CGAGCTGCAG
ATCGCGCTGC GCGTCAAGCT GCCGATGCTC GCCCCGACGC TGACGCTGGT GACCGTCTTC
TCGCTGATCG GCGCGCTGCA GCTGTTCAAC GAGCCCACGA CGCTCAAGCC GGTCACCAAC
GCGATCAGCT CGACCTGGGT GCCCTTGATG AGGGTCTACA CCGACGCCTT CGTCGACAAC
GACATCTACC GCGGGGCGGC CGCCTCGTTC CTGCTCATCG TGCTGACGGT CGCCGCGACC
GTGGCCGCCA ACACGGTGCT CCGTCTAGTA GCGCGTAGGA GTGAACGATG A
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| Protein sequence | MKVRRRRHTL LPQALLLPAV ALFLLFTVAP GGYAIYLSFM KQKAGGGLFG TDNPTTVFAG
LENYRAAFGD AEFWHSIGRM LLVAVVGVPA TIILSTTFAL CLDAKRARLV GFSRLAIFLP
YAVPGVVATL LWGFMYLPAT SPIGGNTVNY FGSHMVFFSV ANVAVWGVLG FNMVVIYTSL
RGLPRELFQA AELDGASELQ IALRVKLPML APTLTLVTVF SLIGALQLFN EPTTLKPVTN
AISSTWVPLM RVYTDAFVDN DIYRGAAASF LLIVLTVAAT VAANTVLRLV ARRSER
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