| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_17030 |
|---|
| Symbol | |
|---|
| ID | 8400249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 1905463 |
|---|
| End bp | 1906404 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644997767 |
|---|
| Product | carbohydrate ABC transporter membrane protein |
|---|
| Protein accession | YP_003155114 |
|---|
| Protein GI | 257068859 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000718721 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC TCGAGACCGC GCCCCGGGCA CGGGGACGAC GACTCTCCCA CCGCAGCTGG
AGAGCGCCCT ACCTCTTCCT GGCGCCCGCC GGGATCCTGT TCCTCGCCTT CCTCGCGATC
CCCATCGCCT ACGCGCTGTA TCTGAGCGTG CGCGGGATGC AGATCGAGGA CTCCGGCCCG
TTCGGCGTCC AGACCGACGC CTGGGTGGGG TTCTCCAACT ACCTCCAGGC GCTCACCGAT
GCCGAGTTCC TGGCCGGTTT CACCCGCCTC CTGGTCTACG GGCTGCTGGC CGTGCCGCTC
ACCCTCGGGC TCGCGCTCCT GTTCGCGCTC CTGCTGGATC TGCCGCGCGT GCGCGCGGTG
CGGTTCTCGC GCACGGCGAT CTTCGTCCCC TACGCCGTGC CGGGCGTGAT CGCCTCGCTC
CTGTGGGGGT TCCTGTACCT GCCCACCACG AGCCCGCTGA ACTGGGTGCT CGAGCAGCTC
GGGCTGCCGG GGGTGGAGCT GCTCAGCGGC TCCCTGCTCT ACCCGGCGAT CGCGAACATC
GCGGTGTGGA CCGGGGTGGG CTTCAACATG ATCATCATCT ACACGTCCCT GCGGGGGATC
CCCGAGGAGA TCTACGAGGC GGCGCGGCTG GACGGCGCCA CCGAGACGGC CATCTCCTGG
CGGATCAAGA TCCCGCTCGT CGCCCCCGCG CTCGTGCTCA CCGGGCTGTT CTCCCTGATC
GGCACGCTCC AGCTGTACGG CGAACCGACC ACGCTGCGCC CGATGACCAC GGAGATCTCC
CAGACCTGGG TGCCGCTGAT GAAGATCTAC CGCGACGCCT TCGCCCGCGA CGACATGTGG
CTGGCGGCCG CCTCCTCCGT GCTCCTGGCC GTGGGGACCC TGATCCTGTC CGTCATCCTG
CTGCGCCTCA CCCAGCGCAG CGCCTTCGGA GGAGACGAGT GA
|
|---|
| Protein sequence | MTALETAPRA RGRRLSHRSW RAPYLFLAPA GILFLAFLAI PIAYALYLSV RGMQIEDSGP
FGVQTDAWVG FSNYLQALTD AEFLAGFTRL LVYGLLAVPL TLGLALLFAL LLDLPRVRAV
RFSRTAIFVP YAVPGVIASL LWGFLYLPTT SPLNWVLEQL GLPGVELLSG SLLYPAIANI
AVWTGVGFNM IIIYTSLRGI PEEIYEAARL DGATETAISW RIKIPLVAPA LVLTGLFSLI
GTLQLYGEPT TLRPMTTEIS QTWVPLMKIY RDAFARDDMW LAAASSVLLA VGTLILSVIL
LRLTQRSAFG GDE
|
|---|
| |