| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5702 |
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| Symbol | |
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| ID | 7975755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 416657 |
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| End bp | 417559 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796284 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002947558 |
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| Protein GI | 239820373 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAA AAGGGGCCTC CTACGAGGCG CAGCGGAGCC GCTTCGTGCG CATGGCGATG
GCGCCGAGCC TGCTGTTCCT GCTGGTGGTG GCGGGGCTGC CCACCGTCTT CCTGCTGGTC
ACGAGCCTCA CGCCCGGGGC GCTGGTGAAC CCGGGCTCGC TGGGCGACTT CTCGGAGCCG
CTGCGCAACT ACAGGCTGCT GGGCAGCGAC GAGCGCTTCG TCGGCTCGCT GGGCGTGCAG
GCGCGCCTTT CGGTCTACAC GGTCGTGCTG CAGGTGCTGC TGGGCACGGG GCTCGCGCTG
CTCGTGCATT CGGGGCAGGA GCGCTGGAAA TCGCTGCGCC ACCTGTTCGT GATTCCGATG
GTGCTGCCGC CGATCGTTGT CGCAGTGATC TGGAAGCTGG TCTACACGCC CGACATCAGT
CCGATCTACC AGGCCGCCCG CATGCTCGGC GTGACACTGC CGGCGCTCAC CACGCACGTC
GACTTCGCGC TGTGGTCCAT CGTCATCGCC GACACCTGGG AGTGGGCACC GTTCACCTTC
CTGATGGTGC TGGCCGCCTT GCAGACGCTG CCGGCCGAAT ACGTCGAGGC CGCCCGCATG
GACGGCGCCG ATGCCTGGCG CGTGTTCGGC CACATCGTGC TGCCGTACAT CGCACCGGTG
CTGCTGGTGT GCACCCTGTT CCGCCTCATC GACAGCATCA AGGCCTTTCC GCTGATCTTC
CTCTTGACCG GCGGCGGGCC GGGTTCGGTG ACGGAGGTGA CCAACTACTA CGCCTACCTC
GTGGCGTTCA ACTTCGGCGA GCTCGGCTAT TCGAGCGCGA TCACCGTCGT GCTGCTCGCG
GCCACCGTGC TGATCAGCTG GGGTGCGATG CGCGTGAGCC GCAATGCGGG AGGTGCGGAA
TGA
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| Protein sequence | MSAKGASYEA QRSRFVRMAM APSLLFLLVV AGLPTVFLLV TSLTPGALVN PGSLGDFSEP
LRNYRLLGSD ERFVGSLGVQ ARLSVYTVVL QVLLGTGLAL LVHSGQERWK SLRHLFVIPM
VLPPIVVAVI WKLVYTPDIS PIYQAARMLG VTLPALTTHV DFALWSIVIA DTWEWAPFTF
LMVLAALQTL PAEYVEAARM DGADAWRVFG HIVLPYIAPV LLVCTLFRLI DSIKAFPLIF
LLTGGGPGSV TEVTNYYAYL VAFNFGELGY SSAITVVLLA ATVLISWGAM RVSRNAGGAE
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