More than 300 homologs were found in PanDaTox collection
for query gene Dgeo_1168 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008025  Dgeo_1168  binding-protein-dependent transport systems inner membrane component  100 
 
 
310 aa  621  1e-177  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.155614  normal 
 
 
-
 
NC_014212  Mesil_0285  binding-protein-dependent transport systems inner membrane component  50.49 
 
 
318 aa  287  1e-76  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  46.62 
 
 
299 aa  245  8e-64  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  45.23 
 
 
293 aa  237  2e-61  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  45.39 
 
 
300 aa  237  2e-61  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  45.39 
 
 
300 aa  237  2e-61  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0524  binding-protein-dependent transport systems inner membrane component  45.09 
 
 
303 aa  230  3e-59  Petrotoga mobilis SJ95  Bacteria  normal  0.693678  n/a   
 
 
-
 
NC_011726  PCC8801_4236  binding-protein-dependent transport systems inner membrane component  43.73 
 
 
294 aa  216  4e-55  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4298  binding-protein-dependent transport systems inner membrane component  43.73 
 
 
294 aa  216  4e-55  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.200183 
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  37.71 
 
 
310 aa  210  2e-53  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_007413  Ava_4638  binding-protein dependent transport system inner membrane protein  39.41 
 
 
308 aa  207  2e-52  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000461706  normal  0.23331 
 
 
-
 
NC_008820  P9303_15561  putative lactose transporter  46.15 
 
 
302 aa  207  2e-52  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.334934 
 
 
-
 
NC_007513  Syncc9902_1051  lactose transport system permease protein  43.12 
 
 
306 aa  202  8e-51  Synechococcus sp. CC9902  Bacteria  normal  0.390377  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  40.68 
 
 
309 aa  201  1.9999999999999998e-50  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_1449  lactose transport system permease protein  41.34 
 
 
290 aa  200  3e-50  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0650773 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
306 aa  196  5.000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  36.42 
 
 
305 aa  193  3e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  37.95 
 
 
320 aa  189  7e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  37.54 
 
 
307 aa  189  7e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
299 aa  186  6e-46  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  39.71 
 
 
300 aa  185  7e-46  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  36.93 
 
 
324 aa  184  1.0000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
299 aa  182  5.0000000000000004e-45  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  35.07 
 
 
288 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  41.25 
 
 
310 aa  180  2.9999999999999997e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  34.97 
 
 
321 aa  179  4e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  36.01 
 
 
320 aa  179  7e-44  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  35.95 
 
 
317 aa  179  7e-44  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  36.01 
 
 
315 aa  179  7e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
290 aa  179  7e-44  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  37.35 
 
 
294 aa  177  1e-43  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
309 aa  177  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  37.46 
 
 
314 aa  178  1e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
319 aa  177  3e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  40.93 
 
 
294 aa  176  3e-43  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  37.54 
 
 
316 aa  176  4e-43  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
318 aa  176  5e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
306 aa  176  5e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
318 aa  176  6e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  40.73 
 
 
299 aa  175  7e-43  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
295 aa  175  8e-43  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
307 aa  175  9e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  37.14 
 
 
307 aa  175  9e-43  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013739  Cwoe_4882  binding-protein-dependent transport systems inner membrane component  35.88 
 
 
313 aa  174  9.999999999999999e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.115668  normal 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
311 aa  174  9.999999999999999e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_012669  Bcav_0941  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
313 aa  174  9.999999999999999e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.737632 
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  38.76 
 
 
279 aa  175  9.999999999999999e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  37.69 
 
 
318 aa  174  9.999999999999999e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
318 aa  174  9.999999999999999e-43  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  34.87 
 
 
305 aa  174  1.9999999999999998e-42  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  34.83 
 
 
321 aa  173  2.9999999999999996e-42  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7038  binding-protein-dependent transport systems inner membrane component  40.59 
 
 
309 aa  173  2.9999999999999996e-42  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
297 aa  173  2.9999999999999996e-42  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0699  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
291 aa  173  2.9999999999999996e-42  Dickeya dadantii Ech703  Bacteria  normal  0.216687  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  35.46 
 
 
296 aa  173  3.9999999999999995e-42  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
317 aa  173  3.9999999999999995e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  39.45 
 
 
292 aa  172  5e-42  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  36.47 
 
 
296 aa  172  5e-42  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  37.68 
 
 
322 aa  172  6.999999999999999e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_013131  Caci_3807  binding-protein-dependent transport systems inner membrane component  41.54 
 
 
316 aa  172  9e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.922708  normal  0.915782 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
307 aa  171  1e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
316 aa  171  1e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
296 aa  171  2e-41  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
293 aa  170  2e-41  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
296 aa  171  2e-41  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
296 aa  171  2e-41  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  37.83 
 
 
324 aa  171  2e-41  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_008541  Arth_3147  binding-protein-dependent transport systems inner membrane component  35.99 
 
 
319 aa  170  3e-41  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00382098  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  37.32 
 
 
294 aa  170  3e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
300 aa  170  3e-41  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  37 
 
 
316 aa  169  4e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  37.16 
 
 
314 aa  169  4e-41  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  36.29 
 
 
314 aa  169  6e-41  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  36.29 
 
 
314 aa  169  6e-41  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  35.66 
 
 
301 aa  167  1e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  39.16 
 
 
317 aa  168  1e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
321 aa  167  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_2484  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
318 aa  168  1e-40  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.575298  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  36.13 
 
 
309 aa  168  1e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  32.43 
 
 
296 aa  167  2e-40  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
296 aa  167  2e-40  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  37.58 
 
 
319 aa  167  2.9999999999999998e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  34.28 
 
 
289 aa  167  2.9999999999999998e-40  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  31.18 
 
 
294 aa  167  2.9999999999999998e-40  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  38.06 
 
 
354 aa  166  5e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
321 aa  166  5e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2648  binding-protein-dependent transport systems inner membrane component  33.89 
 
 
315 aa  166  5e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.604604  n/a   
 
 
-
 
NC_013947  Snas_3122  binding-protein-dependent transport systems inner membrane component  39.84 
 
 
305 aa  166  5.9999999999999996e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.99861  hitchhiker  0.000381845 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
314 aa  166  5.9999999999999996e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_008541  Arth_3323  binding-protein-dependent transport systems inner membrane component  34.54 
 
 
317 aa  166  6.9999999999999995e-40  Arthrobacter sp. FB24  Bacteria  normal  0.0473972  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
291 aa  165  9e-40  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  32.09 
 
 
296 aa  165  9e-40  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  37.76 
 
 
309 aa  165  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_013530  Xcel_2115  binding-protein-dependent transport systems inner membrane component  35.77 
 
 
319 aa  164  1.0000000000000001e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.438975  n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  32.72 
 
 
295 aa  164  1.0000000000000001e-39  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
296 aa  165  1.0000000000000001e-39  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
318 aa  165  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  36.7 
 
 
318 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
314 aa  165  1.0000000000000001e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  36.05 
 
 
275 aa  164  2.0000000000000002e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
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