| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0850 |
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| Symbol | |
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| ID | 4076025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 902829 |
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| End bp | 903710 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006148 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612845 |
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| Protein GI | 99080691 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.16436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAC GCGTCCATTT CCCATCTTCC CTGCTGCCCT ACCTACTGGT CGCGCCTCAA
ATCGCGATCA CTTTGGTGTT TTTCATCTGG CCCGCCGCAC AGGCGGTCTA TCAGTCGTTC
CTCATCGAGG ATGCCTTTGG TTTGTCGACC GAATTCGTTT GGTTGGAGAA CTTCGAGCTG
TTGTTTGAGG ACGATATCTA CCTGGCCACC TTTGGCCGGA CGATCTTCTT TTCCGCTGCC
GTAGCGATCC TGTCTATGTC GCTGGCCCTG ATTCTTGCGG GCTTCGCGGA CCGGGTGGTG
CGCGGCGCGA CGGCCTATCG CACACTCCTG ATCTGGCCCT ACGCCGTGGC GCCGGTTCTG
GCGGGTGCGC TTTGGGTGTT CATGTTCAAC CCGACGCTGG GGATCTTCCC CTATATCCTT
GATTTTGTCG GCGTGGACTG GAACCACTAT CTCAACGGCA ATCAGGCGAT GGCTCTGGTG
GTCTTTGCCT CCGCTTGGAA GCAGATCGCC TATAACTTCC TGTTCTATCT TGCGGCGATG
CAGGCCATTC CGCGCTCGGT GATCGAGGCG GCGGCGATTG ATGGGGCAGG CCCGATCCGC
CGGTTCAAGG ATTTCATCTT CCCGCTGGTG TCTCCGACCA CCTTCTTCCT GTTGGTCATC
AACGCGGTCT ACGCCTTCTT TGACACCTTC GGCATTATCC ACGCGGTGAC GCAGGGCGGT
CCCGCAAATT CCACCACGAT CCTTGTTTAC AAGGTGTTCA ACGACGGCTT TGTCGGGCTT
GATCTTGGCG GCTCTGCCGC ACAATCGGTG ATCCTGATGG TGCTGGTCAT TGCCATGACC
GTGGTCCAGT TCCGCTTTGT CGAGAGAAGG GTGCAGTACT GA
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| Protein sequence | MLKRVHFPSS LLPYLLVAPQ IAITLVFFIW PAAQAVYQSF LIEDAFGLST EFVWLENFEL
LFEDDIYLAT FGRTIFFSAA VAILSMSLAL ILAGFADRVV RGATAYRTLL IWPYAVAPVL
AGALWVFMFN PTLGIFPYIL DFVGVDWNHY LNGNQAMALV VFASAWKQIA YNFLFYLAAM
QAIPRSVIEA AAIDGAGPIR RFKDFIFPLV SPTTFFLLVI NAVYAFFDTF GIIHAVTQGG
PANSTTILVY KVFNDGFVGL DLGGSAAQSV ILMVLVIAMT VVQFRFVERR VQY
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