More than 300 homologs were found in PanDaTox collection
for query gene TK90_1314 on replicon NC_013889
Organism: Thioalkalivibrio sp. K90mix



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013889  TK90_1314  transcriptional regulator, LuxR family  100 
 
 
204 aa  422  1e-117  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.404844  normal 
 
 
-
 
NC_007908  Rfer_3768  LuxR family transcriptional regulator  35.14 
 
 
231 aa  124  7e-28  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0302  LuxR family transcriptional regulator  39.42 
 
 
227 aa  117  9.999999999999999e-26  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3200  LuxR family transcriptional regulator  35.15 
 
 
205 aa  110  1.0000000000000001e-23  Dechloromonas aromatica RCB  Bacteria  normal  0.618751  normal  0.891545 
 
 
-
 
NC_011138  MADE_02940  putative LuxR-family transcriptional regulator  32.28 
 
 
198 aa  90.5  1e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.775864  n/a   
 
 
-
 
NC_007520  Tcr_0205  LuxR family transcriptional regulator  33.58 
 
 
205 aa  90.1  2e-17  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.67 
 
 
258 aa  83.6  0.000000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_009654  Mmwyl1_2822  response regulator receiver protein  32.58 
 
 
211 aa  82.8  0.000000000000003  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.473652 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  38.73 
 
 
226 aa  81.3  0.00000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_007614  Nmul_A2674  two component LuxR family transcriptional regulator  36.57 
 
 
203 aa  79.7  0.00000000000003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.125422  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  31.69 
 
 
216 aa  79.3  0.00000000000004  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  31.72 
 
 
208 aa  77.4  0.0000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2235  regulatory protein, LuxR  34.35 
 
 
231 aa  77.4  0.0000000000001  Salinispora tropica CNB-440  Bacteria  normal  0.422182  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.42 
 
 
230 aa  77  0.0000000000002  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  36.72 
 
 
228 aa  76.3  0.0000000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  35.88 
 
 
224 aa  76.3  0.0000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  33.08 
 
 
213 aa  75.9  0.0000000000004  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  34.81 
 
 
213 aa  75.1  0.0000000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_013512  Sdel_0795  regulatory protein LuxR  31.79 
 
 
202 aa  75.1  0.0000000000007  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.0000492678  n/a   
 
 
-
 
NC_009802  CCC13826_0894  putative outer membrane component of efflux system  24.17 
 
 
211 aa  73.9  0.000000000001  Campylobacter concisus 13826  Bacteria  hitchhiker  0.00401485  n/a   
 
 
-
 
NC_008009  Acid345_2348  two component LuxR family transcriptional regulator  32.67 
 
 
219 aa  73.2  0.000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.524488 
 
 
-
 
NC_008789  Hhal_1965  two component LuxR family transcriptional regulator  35.29 
 
 
217 aa  72.8  0.000000000003  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  35.77 
 
 
217 aa  72.4  0.000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.51 
 
 
226 aa  72.4  0.000000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  35.66 
 
 
224 aa  72.4  0.000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  34.62 
 
 
221 aa  72  0.000000000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  34.59 
 
 
213 aa  72  0.000000000006  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  38.17 
 
 
239 aa  71.6  0.000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.377169 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  35.94 
 
 
214 aa  71.6  0.000000000007  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  35.86 
 
 
227 aa  71.6  0.000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  33.58 
 
 
221 aa  71.2  0.000000000008  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0179337 
 
 
-
 
NC_007964  Nham_0273  two component LuxR family transcriptional regulator  32.84 
 
 
231 aa  71.6  0.000000000008  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1309  two component LuxR family transcriptional regulator  37.69 
 
 
206 aa  71.2  0.000000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000148999  n/a   
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  33.57 
 
 
224 aa  71.2  0.000000000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  38.46 
 
 
212 aa  71.2  0.000000000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  34.35 
 
 
221 aa  71.2  0.000000000009  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  33.51 
 
 
213 aa  71.2  0.000000000009  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  28.57 
 
 
216 aa  71.2  0.00000000001  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  33.51 
 
 
213 aa  71.2  0.00000000001  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000185138 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  34.07 
 
 
226 aa  70.5  0.00000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  32.96 
 
 
207 aa  70.5  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  32.84 
 
 
233 aa  70.9  0.00000000001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.88 
 
 
261 aa  70.9  0.00000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  35.97 
 
 
226 aa  69.7  0.00000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.82 
 
 
222 aa  70.5  0.00000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  31.69 
 
 
219 aa  70.5  0.00000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  35.88 
 
 
226 aa  70.1  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  36.36 
 
 
218 aa  70.1  0.00000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0807  two component transcriptional regulator, LuxR family  30.66 
 
 
228 aa  70.1  0.00000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.218712 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  31.25 
 
 
215 aa  70.1  0.00000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  33.6 
 
 
222 aa  69.7  0.00000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  34.35 
 
 
225 aa  69.3  0.00000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  33.57 
 
 
213 aa  69.7  0.00000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  32 
 
 
225 aa  69.3  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_009664  Krad_2658  two component transcriptional regulator, LuxR family  33.58 
 
 
215 aa  69.3  0.00000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.09 
 
 
219 aa  69.3  0.00000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.263807 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  36.43 
 
 
209 aa  68.9  0.00000000004  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  34.81 
 
 
223 aa  69.3  0.00000000004  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  34.35 
 
 
220 aa  69.3  0.00000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  31.21 
 
 
215 aa  69.3  0.00000000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  31.85 
 
 
215 aa  68.6  0.00000000006  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  32.02 
 
 
225 aa  68.6  0.00000000006  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  31.62 
 
 
210 aa  68.2  0.00000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_0670  two component LuxR family transcriptional regulator  32.82 
 
 
265 aa  68.6  0.00000000007  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.998369  normal  0.706802 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  31.85 
 
 
215 aa  68.6  0.00000000007  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  31.3 
 
 
231 aa  68.6  0.00000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  31.85 
 
 
215 aa  68.2  0.00000000007  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  33.57 
 
 
220 aa  68.6  0.00000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  37.39 
 
 
211 aa  68.6  0.00000000007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  35.56 
 
 
222 aa  68.6  0.00000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  29.45 
 
 
234 aa  67.8  0.0000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  35.61 
 
 
211 aa  67.8  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.88 
 
 
229 aa  67.4  0.0000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  33.59 
 
 
228 aa  67.4  0.0000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.23 
 
 
244 aa  67.8  0.0000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  30.08 
 
 
213 aa  67.8  0.0000000001  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  33.33 
 
 
234 aa  67.4  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  35.61 
 
 
220 aa  67.8  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  34.35 
 
 
225 aa  67.8  0.0000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  31.11 
 
 
215 aa  66.6  0.0000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  33.82 
 
 
214 aa  67  0.0000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  35.07 
 
 
226 aa  66.6  0.0000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_012791  Vapar_3199  two component transcriptional regulator, LuxR family  31.72 
 
 
262 aa  67  0.0000000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  34.59 
 
 
219 aa  67  0.0000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_011894  Mnod_3782  two component transcriptional regulator, LuxR family  33.58 
 
 
223 aa  67  0.0000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  34.27 
 
 
213 aa  66.6  0.0000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  34.07 
 
 
221 aa  66.6  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  36.64 
 
 
212 aa  67  0.0000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  31.34 
 
 
229 aa  67  0.0000000002  Opitutus terrae PB90-1  Bacteria  normal  normal  0.460798 
 
 
-
 
NC_009523  RoseRS_1633  two component LuxR family transcriptional regulator  31.94 
 
 
254 aa  67  0.0000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  29.41 
 
 
227 aa  67  0.0000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  31.29 
 
 
243 aa  67.4  0.0000000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  34.71 
 
 
212 aa  66.6  0.0000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  35.11 
 
 
220 aa  66.6  0.0000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  36.09 
 
 
239 aa  66.6  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  36.22 
 
 
209 aa  66.6  0.0000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.58 
 
 
216 aa  66.2  0.0000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  33.81 
 
 
218 aa  66.2  0.0000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  35.11 
 
 
215 aa  66.2  0.0000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  35.11 
 
 
212 aa  66.2  0.0000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
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