More than 300 homologs were found in PanDaTox collection
for query gene Sked_11330 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013521  Sked_11330  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 		 224 aa  440  1e-123  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.0103975 
 
 
-
 
NC_013174  Jden_1659  two component transcriptional regulator, LuxR family  89.71 
 
 		 207 aa  346  2e-94  Jonesia denitrificans DSM 20603  Bacteria  normal  0.319135  normal  0.0403017 
 
 
-
 
NC_014151  Cfla_2290  two component transcriptional regulator, LuxR family  82.18 
 
 		 208 aa  314  6e-85  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.00802134  hitchhiker  0.000628596 
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  69.12 
 
 		 208 aa  284  7e-76  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal  1 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  53.4 
 
 		 209 aa  204  1e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  50.72 
 
 		 233 aa  200  9.999999999999999e-51  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  46.23 
 
 		 221 aa  193  2e-48  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  46 
 
 		 219 aa  189  4e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.49 
 
 		 214 aa  187  1e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_18340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.13 
 
 		 209 aa  187  1e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  47.78 
 
 		 219 aa  186  3e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_013093  Amir_1910  two component transcriptional regulator, LuxR family  46.34 
 
 		 218 aa  184  7e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4749  two component transcriptional regulator, LuxR family  46.08 
 
 		 223 aa  184  8e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.77 
 
 		 239 aa  183  2.0000000000000003e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.711047 
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  48.06 
 
 		 212 aa  182  3e-45  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  46.15 
 
 		 218 aa  182  4.0000000000000006e-45  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  46.46 
 
 		 213 aa  181  5.0000000000000004e-45  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal  1 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  45.15 
 
 		 216 aa  181  7e-45  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_009338  Mflv_3847  two component LuxR family transcriptional regulator  43.4 
 
 		 216 aa  181  8.000000000000001e-45  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.118356  decreased coverage  0.00872558 
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  47.57 
 
 		 212 aa  181  8.000000000000001e-45  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.967001 
 
 
-
 
NC_013131  Caci_0094  two component transcriptional regulator, LuxR family  47.17 
 
 		 233 aa  180  1e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0277195 
 
 
-
 
NC_013595  Sros_3524  response regulator receiver protein  46.97 
 
 		 214 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0390864  normal  1 
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  45.85 
 
 		 223 aa  179  2e-44  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_2136  two component LuxR family transcriptional regulator  45.02 
 
 		 254 aa  180  2e-44  Arthrobacter sp. FB24  Bacteria  normal  0.0553154  n/a   
 
 
-
 
NC_008726  Mvan_1427  two component LuxR family transcriptional regulator  45.1 
 
 		 212 aa  180  2e-44  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  45.15 
 
 		 244 aa  180  2e-44  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  46.27 
 
 		 216 aa  177  9e-44  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  47.95 
 
 		 225 aa  177  2e-43  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.665179 
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  46.86 
 
 		 231 aa  175  4e-43  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_009565  TBFG_13154  two component system transcriptional regulatory protein DevR  44.06 
 
 		 217 aa  175  4e-43  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  43.9 
 
 		 213 aa  174  9e-43  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_4126  two component LuxR family transcriptional regulator  43.14 
 
 		 220 aa  174  9.999999999999999e-43  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4201  two component LuxR family transcriptional regulator  43.14 
 
 		 215 aa  174  9.999999999999999e-43  Mycobacterium sp. KMS  Bacteria  normal  0.180608  normal  1 
 
 
-
 
NC_009077  Mjls_4357  two component LuxR family transcriptional regulator  43.14 
 
 		 215 aa  174  9.999999999999999e-43  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.171113 
 
 
-
 
NC_008146  Mmcs_1076  two component LuxR family transcriptional regulator  43.72 
 
 		 228 aa  173  1.9999999999999998e-42  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_1092  two component LuxR family transcriptional regulator  43.72 
 
 		 228 aa  173  1.9999999999999998e-42  Mycobacterium sp. KMS  Bacteria  normal  0.123414  normal  0.110897 
 
 
-
 
NC_009077  Mjls_1103  two component LuxR family transcriptional regulator  43.72 
 
 		 228 aa  173  1.9999999999999998e-42  Mycobacterium sp. JLS  Bacteria  normal  0.191898  normal  1 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  45.02 
 
 		 216 aa  173  1.9999999999999998e-42  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  45.32 
 
 		 231 aa  172  2.9999999999999996e-42  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  42.38 
 
 		 211 aa  172  3.9999999999999995e-42  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_011886  Achl_2073  two component transcriptional regulator, LuxR family  41.23 
 
 		 226 aa  172  5e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000764485 
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  43.69 
 
 		 224 aa  171  1e-41  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  45.97 
 
 		 216 aa  170  1e-41  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  41.41 
 
 		 226 aa  169  3e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6098  two component transcriptional regulator, LuxR family  44.19 
 
 		 218 aa  169  4e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_3035  LuxR response regulator receiver  44.91 
 
 		 223 aa  167  9e-41  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3097  two component transcriptional regulator, LuxR family  44.33 
 
 		 222 aa  165  5e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.472018  normal  0.507317 
 
 
-
 
NC_008726  Mvan_2548  two component LuxR family transcriptional regulator  43.06 
 
 		 216 aa  160  1e-38  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.971783  normal  1 
 
 
-
 
NC_013757  Gobs_4820  two component transcriptional regulator, LuxR family  49.5 
 
 		 218 aa  158  6e-38  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  41.75 
 
 		 219 aa  150  1e-35  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_2140  response regulator receiver  44 
 
 		 218 aa  150  1e-35  Gordonia bronchialis DSM 43247  Bacteria  normal  0.95288  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  39.23 
 
 		 217 aa  149  4e-35  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  40.2 
 
 		 221 aa  140  9.999999999999999e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  39.13 
 
 		 210 aa  140  1.9999999999999998e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  40.19 
 
 		 216 aa  139  3.9999999999999997e-32  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  37.5 
 
 		 210 aa  137  1e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  37.5 
 
 		 210 aa  137  1e-31  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40.57 
 
 		 226 aa  137  1e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_2079  two component transcriptional regulator, LuxR family  40.1 
 
 		 212 aa  136  2e-31  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  37.5 
 
 		 210 aa  136  2e-31  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  41.31 
 
 		 225 aa  137  2e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  37.5 
 
 		 241 aa  136  3.0000000000000003e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  34.58 
 
 		 216 aa  136  3.0000000000000003e-31  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  37.27 
 
 		 236 aa  136  3.0000000000000003e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  37.5 
 
 		 210 aa  135  4e-31  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  37.5 
 
 		 210 aa  135  4e-31  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  37.5 
 
 		 210 aa  135  4e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  37.5 
 
 		 210 aa  135  4e-31  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  37.5 
 
 		 210 aa  135  4e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  37.5 
 
 		 210 aa  135  4e-31  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  39.09 
 
 		 207 aa  135  7.000000000000001e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  34.5 
 
 		 242 aa  134  8e-31  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  37.5 
 
 		 213 aa  134  9.999999999999999e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  37.5 
 
 		 210 aa  134  9.999999999999999e-31  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  36.27 
 
 		 214 aa  134  9.999999999999999e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  37.86 
 
 		 228 aa  134  9.999999999999999e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  37.32 
 
 		 209 aa  134  9.999999999999999e-31  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_010718  Nther_0692  two component transcriptional regulator, LuxR family  32.68 
 
 		 213 aa  134  9.999999999999999e-31  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  37.02 
 
 		 210 aa  134  9.999999999999999e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_012669  Bcav_2188  two component transcriptional regulator, LuxR family  40.87 
 
 		 220 aa  133  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.546074  normal  1 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  35.62 
 
 		 236 aa  132  6e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  38.28 
 
 		 213 aa  131  6.999999999999999e-30  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  37.62 
 
 		 213 aa  131  7.999999999999999e-30  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  39.23 
 
 		 225 aa  131  9e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  32.54 
 
 		 224 aa  131  1.0000000000000001e-29  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  32.54 
 
 		 224 aa  131  1.0000000000000001e-29  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  38.54 
 
 		 207 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  36.07 
 
 		 242 aa  130  1.0000000000000001e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  32.54 
 
 		 224 aa  130  2.0000000000000002e-29  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  35.78 
 
 		 223 aa  130  2.0000000000000002e-29  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_013947  Snas_4871  two component transcriptional regulator, LuxR family  36.6 
 
 		 222 aa  130  2.0000000000000002e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.134443  normal  0.31614 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  32.06 
 
 		 224 aa  130  2.0000000000000002e-29  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_009523  RoseRS_0938  two component LuxR family transcriptional regulator  36.07 
 
 		 242 aa  130  2.0000000000000002e-29  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  38.94 
 
 		 227 aa  129  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  34.3 
 
 		 215 aa  129  3e-29  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  33.5 
 
 		 215 aa  129  4.0000000000000003e-29  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  34.78 
 
 		 227 aa  129  5.0000000000000004e-29  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  35.07 
 
 		 222 aa  129  5.0000000000000004e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  34.3 
 
 		 215 aa  129  5.0000000000000004e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  37.44 
 
 		 214 aa  129  5.0000000000000004e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.785726 
 
 
-
 
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