More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_6137 on replicon NC_011370
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  61.16 
 
 
671 aa  758    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.519853 
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  60.8 
 
 
671 aa  769    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  80.78 
 
 
666 aa  1098    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  55.07 
 
 
682 aa  688    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  77.81 
 
 
667 aa  1043    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  56.52 
 
 
682 aa  711    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  56.45 
 
 
682 aa  723    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  69.68 
 
 
685 aa  954    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal 
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  100 
 
 
667 aa  1360    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  59.13 
 
 
668 aa  741    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal 
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  60.48 
 
 
668 aa  734    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  56.73 
 
 
682 aa  723    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  55.34 
 
 
667 aa  693    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  65.93 
 
 
669 aa  865    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0599498 
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  62.02 
 
 
673 aa  782    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  59.1 
 
 
662 aa  747    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  59.88 
 
 
671 aa  759    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.124901 
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  78.71 
 
 
670 aa  1077    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  70.31 
 
 
695 aa  939    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  54.45 
 
 
691 aa  701    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  64.43 
 
 
671 aa  851    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.187116 
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  57.14 
 
 
678 aa  743    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  61.02 
 
 
684 aa  765    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  61.02 
 
 
667 aa  765    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.390977 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  59.26 
 
 
675 aa  768    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  59.88 
 
 
662 aa  766    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  70.31 
 
 
666 aa  941    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  56.99 
 
 
669 aa  743    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  60.51 
 
 
671 aa  764    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.60166 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  59.5 
 
 
673 aa  774    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  77.21 
 
 
667 aa  1043    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  68.72 
 
 
680 aa  922    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  54.17 
 
 
684 aa  685    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  64.84 
 
 
673 aa  849    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.776074 
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  60.42 
 
 
667 aa  744    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  60.36 
 
 
671 aa  766    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  54.9 
 
 
682 aa  682    Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  70.04 
 
 
681 aa  950    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal 
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  57.29 
 
 
669 aa  744    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  70.76 
 
 
666 aa  947    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  61.4 
 
 
691 aa  751    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0379768 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  60.77 
 
 
671 aa  757    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  56.56 
 
 
682 aa  719    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  61.77 
 
 
667 aa  776    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  68.83 
 
 
676 aa  951    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  59.76 
 
 
668 aa  769    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal 
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  56.58 
 
 
682 aa  721    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  64.93 
 
 
670 aa  850    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  56.93 
 
 
675 aa  711    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  61.72 
 
 
671 aa  764    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  57.66 
 
 
652 aa  749    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  53.8 
 
 
696 aa  675    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  77.36 
 
 
667 aa  1035    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  56.87 
 
 
669 aa  723    Maricaulis maris MCS10  Bacteria  normal  normal  0.0501395 
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  61.7 
 
 
660 aa  784    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  58.09 
 
 
678 aa  753    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  49.33 
 
 
655 aa  620  1e-176  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  47.38 
 
 
656 aa  613  9.999999999999999e-175  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  44.29 
 
 
691 aa  567  1e-160  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2807  carbamoyl-phosphate synthase L chain, ATP-binding  46.07 
 
 
652 aa  520  1e-146  Marinobacter aquaeolei VT8  Bacteria  normal  0.167198  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  45.14 
 
 
665 aa  512  1e-144  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  54.81 
 
 
450 aa  505  1e-141  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  44.83 
 
 
662 aa  500  1e-140  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1065  acetyl-CoA carboxylase, biotin carboxylase  53.24 
 
 
448 aa  499  1e-140  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000015139  n/a   
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.86 
 
 
668 aa  496  1e-139  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3536  Carbamoyl-phosphate synthase L chain ATP- binding protein  53.5 
 
 
517 aa  493  9.999999999999999e-139  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  49.19 
 
 
498 aa  494  9.999999999999999e-139  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  44.59 
 
 
643 aa  491  1e-137  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  54.32 
 
 
450 aa  490  1e-137  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  42.35 
 
 
681 aa  487  1e-136  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_11348  biotin carboxylase (accC)  53.16 
 
 
480 aa  486  1e-136  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0917166  n/a   
 
 
-
 
NC_009720  Xaut_1855  carbamoyl-phosphate synthase L chain ATP-binding  47.33 
 
 
666 aa  486  1e-136  Xanthobacter autotrophicus Py2  Bacteria  normal  0.181486  normal 
 
 
-
 
NC_013037  Dfer_3259  Carbamoyl-phosphate synthase L chain ATP- binding  50.7 
 
 
501 aa  486  1e-136  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.0256085 
 
 
-
 
NC_009656  PSPA7_2263  putative biotin carboxylase/biotin carboxyl carrier protein  44.67 
 
 
661 aa  486  1e-136  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011694  PHATRDRAFT_51245  carboxylase propionyl-coa carboxylase  41.42 
 
 
664 aa  486  1e-136  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_008463  PA14_26670  putative biotin carboxylase/biotin carboxyl carrier protein  44.67 
 
 
661 aa  486  1e-136  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.795664  normal 
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  54.14 
 
 
493 aa  482  1e-135  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal 
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  42.71 
 
 
653 aa  483  1e-135  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal 
 
 
-
 
NC_013161  Cyan8802_1455  acetyl-CoA carboxylase biotin carboxylase subunit  52.22 
 
 
449 aa  479  1e-134  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12523  acetyl-/propionyl-coenzyme A carboxylase subunit alpha  43.54 
 
 
654 aa  480  1e-134  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.881887 
 
 
-
 
NC_009091  P9301_00711  acetyl-CoA carboxylase biotin carboxylase subunit  50.11 
 
 
449 aa  481  1e-134  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3289  acetyl-CoA carboxylase, biotin carboxylase  54.11 
 
 
496 aa  481  1e-134  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.191323 
 
 
-
 
NC_009505  BOV_0015  biotin carboxylase  44.41 
 
 
673 aa  480  1e-134  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_00721  acetyl-CoA carboxylase biotin carboxylase subunit  49.89 
 
 
449 aa  480  1e-134  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.249054  n/a   
 
 
-
 
NC_007798  NSE_0815  propionyl-CoA carboxylase, alpha subunit  40.2 
 
 
652 aa  481  1e-134  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  0.904428  n/a   
 
 
-
 
NC_009439  Pmen_2030  3-methylcrotonoyl-CoA carboxylase, alpha subunit  43.97 
 
 
644 aa  481  1e-134  Pseudomonas mendocina ymp  Bacteria  normal  0.0317693  normal  0.435789 
 
 
-
 
NC_007964  Nham_2124  carbamoyl-phosphate synthase L chain, ATP-binding  44.18 
 
 
666 aa  480  1e-134  Nitrobacter hamburgensis X14  Bacteria  normal  0.494302  n/a   
 
 
-
 
NC_010424  Daud_1016  acetyl-CoA carboxylase, biotin carboxylase  51.33 
 
 
446 aa  481  1e-134  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.0000000161184  n/a   
 
 
-
 
NC_008061  Bcen_3130  carbamoyl-phosphate synthase L chain, ATP-binding  45.35 
 
 
665 aa  480  1e-134  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5035  carbamoyl-phosphate synthase L chain ATP-binding  45.65 
 
 
665 aa  481  1e-134  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.70526  normal 
 
 
-
 
NC_008228  Patl_0319  carbamoyl-phosphate synthase L chain, ATP-binding  52.76 
 
 
689 aa  482  1e-134  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5237  carbamoyl-phosphate synthase L chain, ATP-binding  45.35 
 
 
665 aa  480  1e-134  Burkholderia cenocepacia HI2424  Bacteria  normal  0.578975  normal  0.758885 
 
 
-
 
NC_004310  BR0018  biotin carboxylase  44.41 
 
 
673 aa  477  1e-133  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  45.37 
 
 
667 aa  478  1e-133  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2788  carbamoyl-phosphate synthase L chain ATP-binding  45.7 
 
 
673 aa  476  1e-133  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.683073  normal  0.298513 
 
 
-
 
NC_008726  Mvan_4090  carbamoyl-phosphate synthase L chain, ATP-binding  45.04 
 
 
660 aa  476  1e-133  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.734303  normal 
 
 
-
 
NC_011886  Achl_1404  Carbamoyl-phosphate synthase L chain ATP-binding  43.93 
 
 
733 aa  476  1e-133  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000000354677 
 
 
-
 
NC_011726  PCC8801_1426  acetyl-CoA carboxylase biotin carboxylase subunit  52 
 
 
449 aa  478  1e-133  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010717  PXO_03803  biotin carboxylase  46.07 
 
 
675 aa  478  1e-133  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1342  pyruvate carboxylase subunit A  50.78 
 
 
494 aa  474  1e-132  Methanococcus maripaludis C7  Archaea  normal  0.492096  normal  0.0929613 
 
 
-
 
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