More than 300 homologs were found in PanDaTox collection
for query gene Pfl01_2838 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_2520  binding-protein-dependent transport systems inner membrane component  72.46 
 
 
530 aa  649    Dickeya zeae Ech1591  Bacteria  normal  0.034918  n/a   
 
 
-
 
NC_007492  Pfl01_2838  binding-protein dependent transport system inner membrane protein  100 
 
 
531 aa  1028    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2535  binding-protein-dependent transport systems inner membrane component  74.4 
 
 
527 aa  640    Serratia proteamaculans 568  Bacteria  normal  0.604854  normal 
 
 
-
 
NC_010465  YPK_1462  binding-protein-dependent transport systems inner membrane component  70.66 
 
 
528 aa  632  1e-180  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1349  iron(III) ABC transporter, permease protein  70.66 
 
 
528 aa  633  1e-180  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2429  binding-protein-dependent transport systems inner membrane component  70.77 
 
 
527 aa  631  1e-180  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2711  iron(III)-transport system permease  70.66 
 
 
528 aa  632  1e-180  Yersinia pestis Angola  Bacteria  normal  0.0924971  normal  0.0430816 
 
 
-
 
NC_013421  Pecwa_1358  binding-protein-dependent transport systems inner membrane component  70.82 
 
 
525 aa  620  1e-176  Pectobacterium wasabiae WPP163  Bacteria  normal  0.41308  n/a   
 
 
-
 
NC_012917  PC1_2920  binding-protein-dependent transport systems inner membrane component  70.23 
 
 
525 aa  602  1.0000000000000001e-171  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.905105  n/a   
 
 
-
 
NC_011369  Rleg2_3782  binding-protein-dependent transport systems inner membrane component  62.6 
 
 
526 aa  590  1e-167  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.865045 
 
 
-
 
NC_012850  Rleg_4111  binding-protein-dependent transport systems inner membrane component  62.6 
 
 
526 aa  586  1e-166  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.43356  normal 
 
 
-
 
NC_008541  Arth_0606  binding-protein-dependent transport systems inner membrane component  57.6 
 
 
536 aa  556  1e-157  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_6135  ABC transporter membrane spanning protein  62 
 
 
513 aa  529  1e-149  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1961  binding-protein-dependent transport systems inner membrane component  56.61 
 
 
526 aa  495  1e-139  Mycobacterium sp. JLS  Bacteria  normal  0.80009  normal 
 
 
-
 
NC_008705  Mkms_2027  binding-protein-dependent transport systems inner membrane component  56.61 
 
 
526 aa  496  1e-139  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1981  binding-protein-dependent transport systems inner membrane component  56.61 
 
 
526 aa  496  1e-139  Mycobacterium sp. MCS  Bacteria  normal  0.0924311  n/a   
 
 
-
 
NC_011886  Achl_0735  binding-protein-dependent transport systems inner membrane component  59.08 
 
 
530 aa  497  1e-139  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009338  Mflv_2857  binding-protein-dependent transport systems inner membrane component  56.82 
 
 
536 aa  461  9.999999999999999e-129  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.145655  normal 
 
 
-
 
NC_007777  Francci3_1591  binding-protein-dependent transport systems inner membrane component  54.77 
 
 
518 aa  451  1e-125  Frankia sp. CcI3  Bacteria  normal  0.543872  normal  0.457937 
 
 
-
 
NC_009921  Franean1_5339  binding-protein-dependent transport systems inner membrane component  54.51 
 
 
509 aa  432  1e-120  Frankia sp. EAN1pec  Bacteria  normal  0.992663  normal  0.953855 
 
 
-
 
NC_008703  Mkms_5749  binding-protein-dependent transport systems inner membrane component  56.1 
 
 
533 aa  433  1e-120  Mycobacterium sp. KMS  Bacteria  normal  normal  0.97601 
 
 
-
 
NC_013757  Gobs_3649  binding-protein-dependent transport systems inner membrane component  52.08 
 
 
500 aa  412  1e-114  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.974086  n/a   
 
 
-
 
NC_008699  Noca_2021  binding-protein-dependent transport systems inner membrane component  49.29 
 
 
522 aa  373  1e-102  Nocardioides sp. JS614  Bacteria  normal  0.0398286  n/a   
 
 
-
 
NC_010676  Bphyt_4827  binding-protein-dependent transport systems inner membrane component  42.91 
 
 
534 aa  324  3e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  0.232577  normal  0.0312056 
 
 
-
 
NC_007952  Bxe_B1836  ABC Fe+3 transporter, inner membrane subunit  42.91 
 
 
534 aa  323  3e-87  Burkholderia xenovorans LB400  Bacteria  normal  0.374127  normal  0.533271 
 
 
-
 
NC_002947  PP_4882  binding-protein-dependent transport systems inner membrane component  42.83 
 
 
521 aa  317  3e-85  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4762  binding-protein-dependent transport systems inner membrane component  42.62 
 
 
521 aa  316  6e-85  Pseudomonas putida F1  Bacteria  normal  0.109676  normal  0.504386 
 
 
-
 
NC_010322  PputGB1_4938  binding-protein-dependent transport systems inner membrane component  41.75 
 
 
521 aa  315  1.9999999999999998e-84  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000107301 
 
 
-
 
NC_010501  PputW619_4672  binding-protein-dependent transport systems inner membrane component  43.03 
 
 
521 aa  308  2.0000000000000002e-82  Pseudomonas putida W619  Bacteria  normal  normal  0.548778 
 
 
-
 
NC_013131  Caci_7420  binding-protein-dependent transport systems inner membrane component  43.98 
 
 
503 aa  307  3e-82  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.0090372  normal 
 
 
-
 
NC_008463  PA14_62010  putative iron ABC transporter, permease protein  43.13 
 
 
512 aa  306  5.0000000000000004e-82  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0428593 
 
 
-
 
NC_007510  Bcep18194_A3949  ABC Fe3+ transporter, inner membrane subunit  43.21 
 
 
532 aa  304  3.0000000000000004e-81  Burkholderia sp. 383  Bacteria  normal  0.305187  normal  0.0483056 
 
 
-
 
NC_007492  Pfl01_0530  binding-protein dependent transport system inner membrane protein  42.64 
 
 
521 aa  283  5.000000000000001e-75  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.162719 
 
 
-
 
NC_013595  Sros_8129  iron ABC transporter, permease protein  40.8 
 
 
502 aa  279  1e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.161316 
 
 
-
 
NC_013235  Namu_1665  binding-protein-dependent transport systems inner membrane component  41.54 
 
 
515 aa  276  6e-73  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000100634  normal  0.0519495 
 
 
-
 
NC_009338  Mflv_3362  binding-protein-dependent transport systems inner membrane component  41.6 
 
 
511 aa  268  2e-70  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.269197  normal  0.697364 
 
 
-
 
NC_011831  Cagg_2417  binding-protein-dependent transport systems inner membrane component  37.62 
 
 
536 aa  261  2e-68  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0253396  normal  0.609444 
 
 
-
 
NC_012803  Mlut_06270  ABC-type Fe3+ transport system, permease component  40.69 
 
 
515 aa  261  3e-68  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0952696  n/a   
 
 
-
 
NC_008726  Mvan_3092  binding-protein-dependent transport systems inner membrane component  39.74 
 
 
514 aa  257  3e-67  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.923953  normal  0.633646 
 
 
-
 
NC_009972  Haur_1721  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
530 aa  253  5.000000000000001e-66  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.353247  n/a   
 
 
-
 
NC_008148  Rxyl_1174  binding-protein-dependent transport systems inner membrane component  37.69 
 
 
528 aa  247  4.9999999999999997e-64  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1430  binding-protein-dependent transport systems inner membrane component  40.57 
 
 
511 aa  240  4e-62  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000545483 
 
 
-
 
NC_013946  Mrub_2271  binding-protein-dependent transport systems inner membrane component  38.41 
 
 
523 aa  237  4e-61  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.0000425777 
 
 
-
 
NC_014212  Mesil_2723  binding-protein-dependent transport systems inner membrane component  37.83 
 
 
530 aa  204  3e-51  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.5168 
 
 
-
 
NC_013202  Hmuk_2276  binding-protein-dependent transport systems inner membrane component  32.59 
 
 
541 aa  202  9.999999999999999e-51  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_010718  Nther_2889  binding-protein-dependent transport systems inner membrane component  30.84 
 
 
543 aa  187  4e-46  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6602  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
530 aa  182  1e-44  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.442605 
 
 
-
 
NC_009523  RoseRS_2293  binding-protein-dependent transport systems inner membrane component  30.2 
 
 
557 aa  175  1.9999999999999998e-42  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_1924  binding-protein-dependent transport systems inner membrane component  30.35 
 
 
540 aa  174  2.9999999999999996e-42  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012029  Hlac_0167  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
536 aa  169  1e-40  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.556719  normal 
 
 
-
 
NC_009767  Rcas_3172  binding-protein-dependent transport systems inner membrane component  30.5 
 
 
540 aa  168  2e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_1463  ABC transporter related protein  33.33 
 
 
1057 aa  166  1.0000000000000001e-39  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_014158  Tpau_2071  binding-protein-dependent transport systems inner membrane component  34.26 
 
 
506 aa  162  2e-38  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_1875  binding-protein-dependent transport systems inner membrane component  33.07 
 
 
545 aa  158  2e-37  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_008340  Mlg_2575  binding-protein-dependent transport systems inner membrane component  30.07 
 
 
568 aa  157  7e-37  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0287363 
 
 
-
 
NC_007614  Nmul_A0731  binding-protein dependent transport system inner membrane protein  27.57 
 
 
567 aa  151  3e-35  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0677887  n/a   
 
 
-
 
NC_007498  Pcar_0894  ABC-type transport system, permease component  30.12 
 
 
553 aa  150  6e-35  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000205423  n/a   
 
 
-
 
NC_011138  MADE_00163  putative ABC-type transport system, permease component  34.98 
 
 
507 aa  147  6e-34  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.452019  n/a   
 
 
-
 
NC_012560  Avin_47290  iron ABC transporter, permease protein  31.03 
 
 
538 aa  144  3e-33  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1189  binding-protein-dependent transport systems inner membrane component  30.17 
 
 
549 aa  144  5e-33  Halorhodospira halophila SL1  Bacteria  normal  0.217598  n/a   
 
 
-
 
NC_007492  Pfl01_5429  binding-protein dependent transport system inner membrane protein  30.87 
 
 
555 aa  140  4.999999999999999e-32  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0325707 
 
 
-
 
NC_009439  Pmen_0330  binding-protein-dependent transport systems inner membrane component  29.27 
 
 
538 aa  140  6e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0122  binding-protein-dependent transport systems inner membrane component  27.36 
 
 
559 aa  137  7.000000000000001e-31  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_5020  binding-protein-dependent transport systems inner membrane component  30.72 
 
 
556 aa  135  1.9999999999999998e-30  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5195  binding-protein-dependent transport systems inner membrane component  31.31 
 
 
540 aa  134  3e-30  Pseudomonas putida KT2440  Bacteria  normal  0.154251  normal 
 
 
-
 
NC_008261  CPF_0441  putative iron ABC transporter, permease protein  22.4 
 
 
533 aa  134  3.9999999999999996e-30  Clostridium perfringens ATCC 13124  Bacteria  normal  0.388151  n/a   
 
 
-
 
NC_009512  Pput_5102  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
540 aa  132  1.0000000000000001e-29  Pseudomonas putida F1  Bacteria  normal  0.497984  normal 
 
 
-
 
NC_010322  PputGB1_5255  binding-protein-dependent transport systems inner membrane component  31.12 
 
 
540 aa  132  1.0000000000000001e-29  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1546  ABC iron transporter, inner membrane subunit  26.68 
 
 
564 aa  132  2.0000000000000002e-29  Psychrobacter arcticus 273-4  Bacteria  normal  0.424688  normal  0.358419 
 
 
-
 
NC_013173  Dbac_0741  binding-protein-dependent transport systems inner membrane component  27.1 
 
 
550 aa  132  2.0000000000000002e-29  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4446  binding-protein-dependent transport systems inner membrane component  26.1 
 
 
550 aa  132  2.0000000000000002e-29  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3753  binding-protein-dependent transport systems inner membrane component  26.73 
 
 
554 aa  129  1.0000000000000001e-28  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.104442 
 
 
-
 
NC_009524  PsycPRwf_0870  binding-protein-dependent transport systems inner membrane component  27.81 
 
 
533 aa  129  2.0000000000000002e-28  Psychrobacter sp. PRwf-1  Bacteria  normal  0.0400876  hitchhiker  0.00000113394 
 
 
-
 
NC_007969  Pcryo_1727  binding-protein-dependent transport systems inner membrane component  26.72 
 
 
561 aa  128  2.0000000000000002e-28  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.368895 
 
 
-
 
NC_004578  PSPTO_0315  iron ABC transporter, permease protein  30.71 
 
 
538 aa  128  3e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0989  iron transport system permease protein  29.55 
 
 
529 aa  127  5e-28  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0177  binding-protein-dependent transport systems inner membrane component  28.45 
 
 
553 aa  127  6e-28  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.445803 
 
 
-
 
NC_009428  Rsph17025_1481  binding-protein-dependent transport systems inner membrane component  29.31 
 
 
557 aa  126  8.000000000000001e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.673481  normal 
 
 
-
 
NC_009253  Dred_1530  binding-protein-dependent transport systems inner membrane component  25.55 
 
 
550 aa  126  1e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  0.714891  n/a   
 
 
-
 
NC_007493  RSP_0163  putative iron(III) ABC transporter, fused inner membrane subunits  29.89 
 
 
557 aa  125  2e-27  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1797  binding-protein-dependent transport systems inner membrane component  29.94 
 
 
557 aa  125  2e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.406299 
 
 
-
 
NC_011769  DvMF_1588  binding-protein-dependent transport systems inner membrane component  25.35 
 
 
563 aa  124  5e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007005  Psyr_0245  binding-protein dependent transport system inner membrane protein  29.46 
 
 
538 aa  122  1.9999999999999998e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1198  binding-protein dependent transport system inner membrane protein  29.15 
 
 
545 aa  119  9.999999999999999e-26  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0454  binding-protein-dependent transport systems inner membrane component  26.51 
 
 
562 aa  118  1.9999999999999998e-25  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009952  Dshi_2023  putative ABC transporter permease component  26.68 
 
 
559 aa  117  5e-25  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.967123  normal  0.0816083 
 
 
-
 
NC_007799  ECH_0972  ABC transporter, permease protein  22.31 
 
 
521 aa  116  8.999999999999998e-25  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  0.200041  n/a   
 
 
-
 
NC_013889  TK90_0298  binding-protein-dependent transport systems inner membrane component  26.05 
 
 
589 aa  116  1.0000000000000001e-24  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0166577  normal 
 
 
-
 
NC_007643  Rru_A0768  binding-protein dependent transport system inner membrane protein  27.44 
 
 
558 aa  115  2.0000000000000002e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6289  binding-protein-dependent transport systems inner membrane component  29.44 
 
 
542 aa  115  2.0000000000000002e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_002978  WD1136  iron compound ABC transporter, permease protein, putative  21.07 
 
 
532 aa  114  4.0000000000000004e-24  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5961  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
542 aa  114  5e-24  Pseudomonas aeruginosa PA7  Bacteria  normal  0.727923  n/a   
 
 
-
 
NC_008463  PA14_68890  putative iron ABC transporter, permease protein  31.92 
 
 
539 aa  114  5e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0317  binding-protein-dependent transport systems inner membrane component  27.94 
 
 
570 aa  113  9e-24  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.931275 
 
 
-
 
NC_008345  Sfri_0637  binding-protein-dependent transport systems inner membrane component  27.53 
 
 
543 aa  113  9e-24  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.744333  n/a   
 
 
-
 
NC_010506  Swoo_0997  binding-protein-dependent transport systems inner membrane component  24.29 
 
 
543 aa  113  1.0000000000000001e-23  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.000511547 
 
 
-
 
NC_008599  CFF8240_0116  iron ABC transporter, permease protein  23.37 
 
 
518 aa  112  1.0000000000000001e-23  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0743  iron(III) ABC transporter, permease protein  27.76 
 
 
544 aa  111  3e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007354  Ecaj_0154  binding-protein dependent transport system inner membrane protein  22.13 
 
 
539 aa  111  3e-23  Ehrlichia canis str. Jake  Bacteria  normal  0.234714  n/a   
 
 
-
 
NC_007510  Bcep18194_A4317  ABC spermidine/putrescine transporter, inner membrane subunit  28.36 
 
 
562 aa  111  3e-23  Burkholderia sp. 383  Bacteria  normal  0.946485  normal  0.426161 
 
 
-
 
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