| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1588 |
|---|
| Symbol | |
|---|
| ID | 7173502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 1957021 |
|---|
| End bp | 1958712 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643540105 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002436004 |
|---|
| Protein GI | 218886683 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 108 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGC TCGCGAAATC CCGTTCCTTC GGCGTGGCCG AGGTGATCCT GGCCATCTCC
ATCGCCGTGC TGGTCATCGT GGTGGCGGTG CCGGTGCTGC TCATCTTCTT CAACGCGTTC
TGGGTGGATG GTTCGCCCAA CTTCACGGAC GTGGTGAAGA TCCTGCGCCA GCCGGACACC
TACGAGGCGC TGCTGAACTC GCTGTTCATC GCCTCTGGCG TCACGGTGAT GAGCACCACC
ATCGGCACCT TCTTCGCCTG GCTGGTCACC CGCACCGACC TGCCCTTCAA GGCCGCCATG
AAGGTGCTGT TCCTGGTGCC GTTCATGCTG CCCTCGTTCA TCGGGGCGCT GGCGTGGAAG
ATGCTGCTCT CGCCCCGCGC GGGGTACATC AACCGGCTGT TCATGGACAC CTTCGGCTTT
TCCGGCCCGG TGTTCGACAT CTACACCTAC CACGGCATCA TGGCCGTGGA GACCATGTAC
CTGTTCCCGT TCGTGTTCAT CCAGGTGTGC GGCGCGCTGG AACGCATGGA CCCCACGCTG
GAGGAGGCGG CGCGCATCTC TGGCGCCAGC CTGTTCACCA TCACCCGCAA GATCACCATC
CCGCTGGTGA TGCCCAGCAT CGTTTCCGGG GCGTTGCTGA TCATGCTGTA CTCCATGGCC
CATTTCGGCA CCGTGGCCGT GCTGGGCATA GAAATCGGCA TCTTCAACAT TCCCACGCTG
ATCTACGAGA AAATCCACCA GAGCGCGGGC AGCTTCCAGT CCATCCGCAC CGGCACCGTG
CTTGCGTCGG TGCTGGTGGT CACGGCAGCG GCCATCATCT GGCTGCAGAA CAAGGTGCTG
GAGCGCGGCC GCTTCCAGAT CATCGCGGGC AAGAGCTTCC GCCCCATGGA ACTGAAGCTG
CGCGGGTTCC GCATTCCCCT GCTGGTGCTG TGCATCGCCT ACATCGCCTT CACCATCGTG
CTGCCCACGG CCACCATCTT CCTGGTGGGC GGGTTGAAGA CCTATGGTCT GCCGCTGACC
ATGGAAAACC TGACCCTGGA CAACTACAAG TTCATCCTGT TCGACTGGCA ACTCACCCGC
GACGCCATAT GGAACAGCGT GTCGCTGGGC CTTGCAGCCG CGCTGATCAC CATGTTCGCG
GGGGTGATGA TCTCGTACGT CATCGTCAAG ATGAAGGTGC GGGGCAAGGG CTTTCTGGAG
TTCCTGGGCA TGCTGCCCTT CTCGGTGCCC GGCTCGGTCA TCGCGCTGGG GGTGATCCTG
GCGTGGAGCG GCAAGTTCGG CATCAACATC TACAATACGG TGTGGATCAT CCTGGTGGCC
TACATCGCGC GGTACATGGC CTTCTCGCTG AAGGCCAACT CCGCGGCTCT GGAACAGGTG
CACGATTCGC TGGTGGAAGC GGCGCGCGCC TGCGGCGCCA CCATGTGGCA GGCCCTGCGC
GACATCGTGC TGCCGCTGGT GCGGCCGGGC ATGCTGGCCG CGTTCTTCCT GATCTTCCTG
CCCGCCCTGC GTGAACTGAC CGTTTCGGTG CTGCTGTACG GGCCCACCAC CCGCACCATC
GGGGTGGCCA TCTACACCCT GAACGAGGAC GGCGAGACGG TGTATTCCGC CGCGCTGGCG
GGCATCGCCC TGATCATCAT CGTCACCGGG CAGACCCTCA TCAAGCGCTT CACCGGCGGC
AACGGGCGAT AG
|
|---|
| Protein sequence | MAALAKSRSF GVAEVILAIS IAVLVIVVAV PVLLIFFNAF WVDGSPNFTD VVKILRQPDT
YEALLNSLFI ASGVTVMSTT IGTFFAWLVT RTDLPFKAAM KVLFLVPFML PSFIGALAWK
MLLSPRAGYI NRLFMDTFGF SGPVFDIYTY HGIMAVETMY LFPFVFIQVC GALERMDPTL
EEAARISGAS LFTITRKITI PLVMPSIVSG ALLIMLYSMA HFGTVAVLGI EIGIFNIPTL
IYEKIHQSAG SFQSIRTGTV LASVLVVTAA AIIWLQNKVL ERGRFQIIAG KSFRPMELKL
RGFRIPLLVL CIAYIAFTIV LPTATIFLVG GLKTYGLPLT MENLTLDNYK FILFDWQLTR
DAIWNSVSLG LAAALITMFA GVMISYVIVK MKVRGKGFLE FLGMLPFSVP GSVIALGVIL
AWSGKFGINI YNTVWIILVA YIARYMAFSL KANSAALEQV HDSLVEAARA CGATMWQALR
DIVLPLVRPG MLAAFFLIFL PALRELTVSV LLYGPTTRTI GVAIYTLNED GETVYSAALA
GIALIIIVTG QTLIKRFTGG NGR
|
|---|
| |