| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5429 |
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| Symbol | |
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| ID | 3714333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 6095941 |
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| End bp | 6097608 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_351157 |
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| Protein GI | 77461650 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0325707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGCCC ACGCAAAACG TGGGCACAAT CATTTGAACG AGACTGTTTC CTTGGCCCAC
CCCGCCCAAC GCCGCTGGTA CCCCATCGTC TTCGCCATCG CCGCGTTGGT GCTGCTCCCC
CTCAGCGTGC TCCTGCTCTC ATGGCAAACC ATCGACCACC AGATCTGGTC GCACCTGTGG
GAAACCCAGA TGCCACGCCT GCTGGGCAAC ACACTGACGC TGGTTTTCGG CGTCGGCGTC
GGTGTGACAC TGATCGGCGT AAGCCTCGCC TGGCTCACCA GCCTCTGCGA ATTCCCCGGC
CGCCGCTGGC TCGACTGGGC GCTGATGCTG CCGTTCGCAA TCCCGGCCTA CGTGCTGGCG
TTCGTGTTCG TCGGCCTGCT GGATTTCGCA GGCCCGGTAC AAACCCTGCT GCGAGAATGG
TTCGGCACCG GCCTGCGCCT GCCGCGAGTG CGCTCCACCG GTGGCGTGAT TCTGGTGTTG
GTGCTGGTGT TTTATCCCTA TGTCTACCTG TTGGCGCGTA CTGCGTTCCT GGCTCAGGGC
AAGGGCCTGA TGGAAGCCGC GCGAGTGCTC GGCCAGTCAC CGTGGCAGGC GTTCTGGCGT
GTGGCATTGC CGATGGCGCG GCCCGCCATC GGTGCCGGCG TGGCGCTGGC GTTGATGGAA
ACCCTGGCGG ATTTCGGTGC GGTGTCGGTG TTCAACTTCG ACACCTTCAC CACCGCGATC
TACAAGACCT GGTACGGCTT CTTCAGCCTG CCAAGCGCCG CGCAACTGGC CAGCCTGTTG
CTGCTGGTGG TGATGCTGGT GCTGTACGGC GAACGTCGCG CGCGCGGCGC CAATCGGGCA
AGTAATGAAC GGCCACGGGT CAAGGCGCTG TATCACCTGC GCGGGCCCAA GGCCTGGGCA
GCGACAGGTT GGTGCGGTCT GGTATTCGCC TGTGCGTTTG TCATTCCGGT GCTGCAACTG
ATGGTGTGGT TCTGGCAGCG CGGGCGATTC GATCTGGATG AACGCTATGC GGGGCTGATT
CTCCATACGC TCTATCTGGG CGGCATGGCG GCGCTGATCA CGGTCAGCGT GGCGATGTTG
CTGGCATTCG CCCGGCGTCT GGCGCCCACC CGGGCGATCA ATTCCGCAGT CGGTCTGGCC
AATCTCGGTT ATGCCTTGCC GGGTTCGGTG CTGGCGGTGT CGATCATGCT CGCGTTCAGT
TATCTGGACC GGGAGCTGGT GATTCCGCTG TCCGGCTGGC TCGGCAGTGC TGGCAAACCG
TTGCTGCTGG GCAGTCTGGC GGCGCTGCTG CTGGCGTATC TGGTGCGTTT CGTGGCGGTG
GCCTATGGGC CTCTGGAAAG CAGTCTGGCG CGTATACGGC CCTCTTTGCC TGAAGCGGCA
CGTAGCCTGG GTGTCAGTGG GCCGCGACTG TTTTTCAAAG TGTATCTGCC GTTGCTGCTG
CCCGGCACGC TCAGCGCCGC GCTGCTGGTG TTCGTCGACG TGCTCAAGGA AATGCCCGCC
ACCCTGCTGA TGCGCCCGTT TGGCTGGGAC ACACTGGCGG TGCGGATCTT CGAAATGACC
AGCGAAGGCG AATGGGCGAG GGCGTCGTTG CCGGCGTTGA CCCTGGTGCT GGTCGGTCTG
TTGCCGGTCA TCGGACTTAT TCGCCGTTCG GCGCATCGAA ACACTTAG
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| Protein sequence | MCAHAKRGHN HLNETVSLAH PAQRRWYPIV FAIAALVLLP LSVLLLSWQT IDHQIWSHLW
ETQMPRLLGN TLTLVFGVGV GVTLIGVSLA WLTSLCEFPG RRWLDWALML PFAIPAYVLA
FVFVGLLDFA GPVQTLLREW FGTGLRLPRV RSTGGVILVL VLVFYPYVYL LARTAFLAQG
KGLMEAARVL GQSPWQAFWR VALPMARPAI GAGVALALME TLADFGAVSV FNFDTFTTAI
YKTWYGFFSL PSAAQLASLL LLVVMLVLYG ERRARGANRA SNERPRVKAL YHLRGPKAWA
ATGWCGLVFA CAFVIPVLQL MVWFWQRGRF DLDERYAGLI LHTLYLGGMA ALITVSVAML
LAFARRLAPT RAINSAVGLA NLGYALPGSV LAVSIMLAFS YLDRELVIPL SGWLGSAGKP
LLLGSLAALL LAYLVRFVAV AYGPLESSLA RIRPSLPEAA RSLGVSGPRL FFKVYLPLLL
PGTLSAALLV FVDVLKEMPA TLLMRPFGWD TLAVRIFEMT SEGEWARASL PALTLVLVGL
LPVIGLIRRS AHRNT
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