| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0530 |
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| Symbol | |
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| ID | 3712998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 614720 |
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| End bp | 616285 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_346263 |
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| Protein GI | 77456758 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.162719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAT CGTTATCCGC CCCCGCTACA CGCGGGGGTT ATGTGCCACG ACGCAAGCGG
CCGTCGATCT GGCTGGTGCT GCCAGTGTTG CTGCTGGTGG TCATGAGCCT GTTGCCGCTG
GCCTACGTCG GGCTCAAAGC CTGGCAAGCA GGCTGGTCCG AGGCGCTGCA CTTGCTGTGG
CGCCCGTATG TGTTCAGCCT GCTGCGCAAC ACGCTGGCGC TGATGGTTGG CGTGACCGTG
ACTTGCGGTG TGATCGGCCT GTCGCTGGCC TGGCTGTTGG AGCGCAGCAA TCTGCCGGGC
CGACAGCTGT GGGGCGTGAT TCTTTGCCTG CCGTTCGCGG TGCCGGCATT TGTCAGCAGC
TTCACCTGGG TTTCGCTCAG CGCGCAGTTC GAAGGACTCG GCGGGGCGAT TCTTGTGATG
AGCCTGTCGA AATACCCGCT GATCTTTCTG CCGGTGGCCG CCACACTGCG CAATCTTGAT
CCCTCCCTTG AAGAATCGGC ACGGACGCTG GGTCAGAATC GCTGGGGCGT GTTTTTCCGC
GTCACCCTTC CACTGCTCTG GCCTTCGCTG CTGGCCGGTT CGCTGCTGAT TGCGCTGCAC
ATGCTGGTGG AATTCGGCGC ACTGTCGATC ATTGGCCTGC AAACCTTTAC CACCGCGATC
TATCAGCAAT TCGAACTGGA ATTCAGCAAT GCCAACGCGG CGATGCTGTC GGCGGTATTG
CTGGCGCTGT GCTTGATGCT GTTGTGGCTG GAGCTGCGCG TGCGCGGCAA GGGCCGGCAC
GTACGCACCG GCCAGGGTGC GGCGCGTCGA GCTGAACAAG TGCGACTGGG CCCTTGGGCG
ATCGCCGGTC AGTTGTATTG CCTGATGCTG GCGATTGTTG GCAGCGGGAT CCCACTGGGC
ATGCTGGCCT ACTGGCTTGC CGTGGGATCG TCAGCAGCCT TCCCGGTGGC GGCAATCACC
GAAGCATTGC TGTCATCGCT GGCTCTATCG CTGGGCGGCG CAGGATTGTG CCTCGTGCTG
GCGGTGCCGG TCGGATTGCT GGTAGTGCGC TACAAAGGCC AACTGGCGAT CTGGGCCGAG
CGCCTGCCCT ATCTGCTGCA CGCCCTGCCG GGATTGGTGA TCGCATTGAC GCTGGTGTAT
TTCGCCCTGC ATTACGTGCC GGCGCTGTAC CAGACCTCCG CGCTGTTGCT GATCGCCTAT
GCGCTGCTGT TTCTGCCTCT GGCTCAGGCA CCGATCCGCA CGGCGCTGAA CAAGGCGGCA
CCGCAACTTG AAGAAGCCGC CCGCACCCTC GGCGCCTCTT CGTTCACGGC GTTCTGCCGG
GTGACTCTAC CGATCATCTT CCCGGCACTG GGCGCAGCGT TTGCGCTGGT ATTTCTGGAT
GCCATGAAGG AACTGACGGC GACGTTGCTG CTGAGCCCCA CAGGGCTCAA CACATTGGCG
ACGGAAGTCT GGGCACACAC CGCGAATGTC GAGTTCGCAG CGGCGGCGCC TTATGCGGCG
TTGTTGATTG TGGTGTCGGG ATTGCCGGTG TATCTGCTGA CGACCCGGAT GTATTTGAGC
CGATAA
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| Protein sequence | MTASLSAPAT RGGYVPRRKR PSIWLVLPVL LLVVMSLLPL AYVGLKAWQA GWSEALHLLW
RPYVFSLLRN TLALMVGVTV TCGVIGLSLA WLLERSNLPG RQLWGVILCL PFAVPAFVSS
FTWVSLSAQF EGLGGAILVM SLSKYPLIFL PVAATLRNLD PSLEESARTL GQNRWGVFFR
VTLPLLWPSL LAGSLLIALH MLVEFGALSI IGLQTFTTAI YQQFELEFSN ANAAMLSAVL
LALCLMLLWL ELRVRGKGRH VRTGQGAARR AEQVRLGPWA IAGQLYCLML AIVGSGIPLG
MLAYWLAVGS SAAFPVAAIT EALLSSLALS LGGAGLCLVL AVPVGLLVVR YKGQLAIWAE
RLPYLLHALP GLVIALTLVY FALHYVPALY QTSALLLIAY ALLFLPLAQA PIRTALNKAA
PQLEEAARTL GASSFTAFCR VTLPIIFPAL GAAFALVFLD AMKELTATLL LSPTGLNTLA
TEVWAHTANV EFAAAAPYAA LLIVVSGLPV YLLTTRMYLS R
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