Gene Pcar_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0894 
Symbol 
ID3724191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1051295 
End bp1052956 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content59% 
IMG OID637750487 
ProductABC-type transport system, permease component 
Protein accessionYP_356319 
Protein GI77918504 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000205423 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGACAC GGTTGTGTCG TGTCTTCACG CGCTTCCGTC CTGATCGGGA TACGGGCTGG 
ACGGTTTTAA TCGGGACCGC TTGTGCCTTG GTACTGGCGC CATTGCTGGT GATTTTCATG
GCCTGGCGGC AGCCGGCTCA CGATATCTGG CATCATTTGT ACGCGACGGT TCTGTTCGAC
CTGTTGGTCA ATTCGCTGGT ACTGGCGGTG GGCGTTTGCG CCGGTTCGGC TGTGCTCGGT
GTCAGCCTGG CCTTGTTGAC GGCCCTATGC GAGTTTCCAG GCAGGCGATT GTTTTCCTGG
GTGCTGTTGC TACCTCTGGC CATGCCGGCT TACGTGCTGG CCGTGGCGGT GCTCGGTTTA
CTGGACTATT CCGGTCCGGT AGCAAGCGTG CTGCGCAGCT TGTTCGGGTC GGCAACATGG
CTGCCACCGG CGCGGTCGAC TCCGGTGATT ATCGGGGTTC TCACCTTGAC CCTTTATCCC
TATGTGTATC TTCTTGCCCG TAACGCATTT CGGACCCAGG GGCAGAGGAT GCTGGAAGCA
GCCTGCTCCC TTGGTTGCAG CCCTTGCCGA GCGTTTTTCA AAGTCGTGCT GCCCATGGCA
CGTCCGTGGA TAGCCGGTGG CGTGATGCTG GTATTGATGG AAACCCTGGC CGATTTCGGC
ACGGTTTCGG CGTTCAATTT CGATACTTTC ACCACCGCCA TTTACAAGGC CTGGTATGGA
TTCTTCTCCC TGCCGGCCGC AGCCCAATTG TCCTCCTGCC TTGTGACCCT GATTTTTGTT
GTGGTGTTGC TTGAGCAACG TCTGCGTAGC CGGCGTCGAT ATGCAGAATC CCGCCCAGTT
GCCGCAGGCA ACCGAATTCA GTTGCGGGGC TGTCGGCGTT GGCTGGCATG TGCCTACGCA
ACGAGTGTGC TTATGCTGGC GTTGGTGTTG CCTGTAGGGC AGCTTTTATA TTGGGCTGTC
GGTTCCTGGG GGGAGGAGTT CAATGTCCGC TATTTCGGGC TTTTGTACCA TTCCCTACGA
TTGGGAATGA TCGGCGCATT GGTTGTGGTG CTGGTGGCGC TGGGGGTGGC CTATGGGCTG
CGCAGACGGC CCGGTCCGGG TCATCGGGCC ATGGTGCGTT TGGCGAATCT GGGGTATGCC
CTGCCGGGGC CGGTTCTGGC GGTTGGGTTG TTTATCCCCA TGATTGGCCT CGATCGGTAT
GTTTCGACGT TCTTGGAGGA AGCTTTCGGC CTGGCTCCCG GTGCCTGGCT CACCGGAACC
GGCTTGGCTA TGCTGATGGC GTATCTGGTG CGTTTTCTGG CTGTGGGATT CAAGACGGTG
GACGGGGCCA TGCACCGGAT TCCGCCCCAA CTCGACGATG CAGCCCGACT CATGGGCCAT
GGAAGTTTCT CGCGATTGAT GCGGCTGCAT CTGCCGCTGC TTAAGAACGG CCTGCTGACT
GCCGCCACCC TGGTGTTCGT CGATGTCATG AAAGAGATGC CGATGACTCT TATGACGCGC
CCTTTTGGTG TCGATACTCT GGCGGTGAAG ATTTTCGAAC TGACCTCCGA GGGAGAATGG
GAAAGGGCCG CATTACCCGC TCTGACCTTG CTGGCTGCAG GCGTGCTGCC CATCGTTCTC
TTTATGCGCG CGGGTCAGGA CCATAGCCTC AGGGCGCGGT AA
 
Protein sequence
MKTRLCRVFT RFRPDRDTGW TVLIGTACAL VLAPLLVIFM AWRQPAHDIW HHLYATVLFD 
LLVNSLVLAV GVCAGSAVLG VSLALLTALC EFPGRRLFSW VLLLPLAMPA YVLAVAVLGL
LDYSGPVASV LRSLFGSATW LPPARSTPVI IGVLTLTLYP YVYLLARNAF RTQGQRMLEA
ACSLGCSPCR AFFKVVLPMA RPWIAGGVML VLMETLADFG TVSAFNFDTF TTAIYKAWYG
FFSLPAAAQL SSCLVTLIFV VVLLEQRLRS RRRYAESRPV AAGNRIQLRG CRRWLACAYA
TSVLMLALVL PVGQLLYWAV GSWGEEFNVR YFGLLYHSLR LGMIGALVVV LVALGVAYGL
RRRPGPGHRA MVRLANLGYA LPGPVLAVGL FIPMIGLDRY VSTFLEEAFG LAPGAWLTGT
GLAMLMAYLV RFLAVGFKTV DGAMHRIPPQ LDDAARLMGH GSFSRLMRLH LPLLKNGLLT
AATLVFVDVM KEMPMTLMTR PFGVDTLAVK IFELTSEGEW ERAALPALTL LAAGVLPIVL
FMRAGQDHSL RAR