| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0177 |
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| Symbol | |
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| ID | 5455436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 202344 |
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| End bp | 204005 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640875738 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001411457 |
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| Protein GI | 154250633 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.445803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGC GTTTCGGCTC CGGCTGGACG GTGGCAGCCC TGGCCGTGGC GCTTGTCGCG
CTCGCCCCCT CCCTCACCGT GCTGTGGAGC CTGACCGCGC CCGCCAGCGA GAATTGGGCG
CATCTGAGCG CAACCGTATT GCCGACCTAT GTGTGGAACA CGCTCAAGCT GATGGGGCTT
GTTGCCCTCA TCACCGCCTT TATCGGCGTC GGCACGGCAT GGCTCGTGGT TTCGACGCGC
TTTCCGGGGC AGCGCATTCT CAACTGGGCA TTGGTGATGC CGCTCGCGAC GCCCGGCTAT
ATCGTTGCCT ATGTCTATAC GGATCTTCTC TCCTTCGCAG GCCCGGTGCA GACGGCGCTT
CGCGGCGTGA CGGGATGGGG CGCCGCCGAT TACTACTTTC CGCCCGTGCG CTCGCTGCCC
GGCGCCGCCA TCATGCTCGG TCTCGTCCTC TACCCTTACG TCTATCTGCT CGCGCGCACG
GCTTTCCAGC GTCAATCCGC GGCCCTGTTC GACGCCGCGC GGATGCTCGG CGCGCGTCCG
TGGCGCGCGT TTATCCGTGT GGCGCTGCCC TGCGCCCGGC CGGCCATTGC GGGCGGGCTC
GCGCTCGTGC TCATGGAAAC GATTTCCGAT TTCGGTGTCG TCGATTATTT CGCCGTGCAG
ACGCTTACCA CCGGCATCTT CCGCACCTGG TTCAATCTCG GCGATGCGCT TGCCGCCGCG
CAGATCGCGG CATGGCTTTT CGTCTTTGCG CTGGCGCTCG TCTTCATCGA GATGGTGAGC
CGGCGTGGCC GTGTCGCCAA TCCCTTGTCG CGCGACATGG CGGCACAGCC ACGGACACTG
AAGGGCGTTC GTGGGTGGGC CGCGCTCATC GCCTGCTCGC TGCCGGTGCT GCTCGGCTTC
GTGGTTCCGG CGCTTGTGCT GCTTCGCTAT GCGATCCTGG AAGGCGATCC GCTATTCGGC
AGGCGGTTCC TCGACTTCGC CTGGAACAGC CTCACGGTTG CAGGCGTTGC GGCCGCACTG
ACCACGCTTC TGGCGCTGCT GCTCACCTAT GGTGAGAGGC TGCATCCAAC GAGGTTCAAC
CGTGTGTCGA TCCGGCTTGC GACGCTCGGC TATGCGCTGC CGGGTGCGAT GATCGCCATC
GGCATTCTCA CGCTGTCGAC CGATATCGAC CGTGCCTTCG GTTCCTTCGC GAACAACCAT
CTCGGCTTCT CGCCCGGCCT CATTCTCACG GGGTCCATTG CCGGTCTCGT CTTCGCCTAT
GTCGCGCGCT TTCTCACGGC AGCGTTCAAT GCAACCCATA GCGGGCTTGA GAAAATTCAT
CCGACGCTCG ATGCGGCGGC GCGCAGTCTC GGGGCGTCGC CGCGGCGGGT GCTTGGCGCC
ATCCATGTGC CGCTGCTGCG CGGCGCGTTG GCGAGCGCGG CGCTGATCGT CTTCATCGAT
GTCATGAAGG AACTTCCGGC GACGCTTCTT CTCCGGCCCT TCAACTTCGA GACGCTGGCG
ACGCGCACCT ACCGCCTTGC CTCCGACGAA AGGCTGGCGG AGGCGTCGAC GGCGGCGCTT
GCCATCGTGG CGCTCGGCCT CATTCCGACG ATCCTGCTCA GCCTGTCACT CTTTCGCAGC
AGCGCACGGC GGGGCCTCGT GCCGGTCCAC ACGGAAAAGT GA
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| Protein sequence | MKQRFGSGWT VAALAVALVA LAPSLTVLWS LTAPASENWA HLSATVLPTY VWNTLKLMGL
VALITAFIGV GTAWLVVSTR FPGQRILNWA LVMPLATPGY IVAYVYTDLL SFAGPVQTAL
RGVTGWGAAD YYFPPVRSLP GAAIMLGLVL YPYVYLLART AFQRQSAALF DAARMLGARP
WRAFIRVALP CARPAIAGGL ALVLMETISD FGVVDYFAVQ TLTTGIFRTW FNLGDALAAA
QIAAWLFVFA LALVFIEMVS RRGRVANPLS RDMAAQPRTL KGVRGWAALI ACSLPVLLGF
VVPALVLLRY AILEGDPLFG RRFLDFAWNS LTVAGVAAAL TTLLALLLTY GERLHPTRFN
RVSIRLATLG YALPGAMIAI GILTLSTDID RAFGSFANNH LGFSPGLILT GSIAGLVFAY
VARFLTAAFN ATHSGLEKIH PTLDAAARSL GASPRRVLGA IHVPLLRGAL ASAALIVFID
VMKELPATLL LRPFNFETLA TRTYRLASDE RLAEASTAAL AIVALGLIPT ILLSLSLFRS
SARRGLVPVH TEK
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