Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4762 |
Symbol | |
ID | 5195443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5333014 |
End bp | 5334579 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589247 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001270066 |
Protein GI | 148549964 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.109676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.504386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCG CCCTGTCCGA ACCGGTGCCG GTACGCTTCG TACCGCGCCG CAAGCGCCCT TCCATCTGGG TAGTGCTGCC TGTGCTGTTC CTTGTGGCAA TGAGCTTGCT GCCACTGGCT TATGTCGCCA TCAAAGCCTG GGAGGCCGGC TGGCGCGAAG CTTTGCACCT GCTGTGGCGG CCCTTTGTCT GGGGGCTGAT GCGCAACACC CTGATGTTGA TGGTCGGGGT GACACTGACC TGCATGGTGG TCGGCCTGGC ACTGGCCTGG CTGCTGGAGC GCAGCAACCT GGCCGGCCGC CGGTTGTGGG GCGTGGTGCT GTGCCTGCCA TTCGCCGTGC CGTCGTTCGT CAGCAGCTTC ACCTGGGTGT CGCTAAGTTC GGACTTTGAA GGCCTGGGCG GCGCGATCAT GGTCATGGCC CTATCCAAAT ACCCACTGGT GTTCCTGCCC GTTGCCGCGA CCCTGCGCAA CCTCGACACG TCGCTGGAGG AGTCGGCACG CACCCTGGGT TGCAGCCGCT GGGGGGTGTT CAGCAAAGTC ACCCTGCCGC TGCTGTGGCC GTCGATGCTC GGCGGTGCGC TACTGATTGC CCTGCATATG CTGGTGGAGT TTGGCGCATT GTCGATCCTC GGCCTGCAAA CCTTTACCAC GGCGATCTAC CAGCAGTTCG AACTGGAGTT CAGCAACGCC AACGCGGCCA TGCTGTCTGC CGTGCTGCTG GCGATGTGCT TGGCAATGCT GTGGCTGGAA CTGCGGGTGC GCGGCAAAGC CCGCCATGTA CGTATCGGCC AGGGCGTAGC CCGGCGTGCG CAACCGGTGC GGCTGCGCGG CTGGGCGGTG CTGGCGCAAC TGTTCTGCGT GGGCCTGGCG GCGCTGGGCA GCGGCATTCC GCTGGCGATG CTCGGTTACT GGCTGAGCGT GGGTTCGTCG GCGGCATTCC CGGTGGCGGC CATCTCGAAG GCGTTGTTCA CCTCGCTGTC GGTGTCGCTG GGCGGTGCCG GCTTCTGTGT GCTGCTGGCT CTGCCTATCA GCTTCCTGGT GGTGCGCTAC AAAGGCCGCC TGGCGATTTG GGCTGAGCGT CTGCCCTACC TCCTGCACGC CCTGCCCGGC CTGGTGATTG CCCTGACCCT GGTGTTCTTC GCCCTGCACT ACGTGCCGGC GCTGTACCAG ACCACGGCCT TGCTGCTGTT GGCCTATGCG CTGCTGTTCC TGCCGTTGGC GCAATCACCG GTGCGCACCG CGCTGAACAA GGCTTCGCCG ACGCTGGAAG AAGCCGCACG CACGCTAGGC GCGAGCAGCT TTGCCGCGTT CTGCCGGGTG ACCTTGCCGA TCATCTTCCC GGCCATGGCG GCAGCCTTTG CGCTGGTGTT CCTGGATGCC ATGAAAGAGC TGACGGCTAC CCTGCTGCTC AGCCCGACCG GCATGACCAC CCTGGCCACC GAGGTGTGGG CACACACAGC CAACGTCGAG TTCGCGGCAG CGGCGCCTTA TGCTGCGTTG CTGATCGTGG TGTCGGGGTT GCCGGTTTAC TTGCTGACTA CGCGGATGTA TCTGAACAAG GCATGA
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Protein sequence | MTAALSEPVP VRFVPRRKRP SIWVVLPVLF LVAMSLLPLA YVAIKAWEAG WREALHLLWR PFVWGLMRNT LMLMVGVTLT CMVVGLALAW LLERSNLAGR RLWGVVLCLP FAVPSFVSSF TWVSLSSDFE GLGGAIMVMA LSKYPLVFLP VAATLRNLDT SLEESARTLG CSRWGVFSKV TLPLLWPSML GGALLIALHM LVEFGALSIL GLQTFTTAIY QQFELEFSNA NAAMLSAVLL AMCLAMLWLE LRVRGKARHV RIGQGVARRA QPVRLRGWAV LAQLFCVGLA ALGSGIPLAM LGYWLSVGSS AAFPVAAISK ALFTSLSVSL GGAGFCVLLA LPISFLVVRY KGRLAIWAER LPYLLHALPG LVIALTLVFF ALHYVPALYQ TTALLLLAYA LLFLPLAQSP VRTALNKASP TLEEAARTLG ASSFAAFCRV TLPIIFPAMA AAFALVFLDA MKELTATLLL SPTGMTTLAT EVWAHTANVE FAAAAPYAAL LIVVSGLPVY LLTTRMYLNK A
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