More than 300 homologs were found in PanDaTox collection
for query gene Hoch_6602 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_6602  binding-protein-dependent transport systems inner membrane component  100 
 
 
530 aa  1005    Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.442605 
 
 
-
 
NC_011831  Cagg_2417  binding-protein-dependent transport systems inner membrane component  40.78 
 
 
536 aa  300  6e-80  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0253396  normal  0.609444 
 
 
-
 
NC_008148  Rxyl_1174  binding-protein-dependent transport systems inner membrane component  46.46 
 
 
528 aa  288  2e-76  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1721  binding-protein-dependent transport systems inner membrane component  41.03 
 
 
530 aa  279  1e-73  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.353247  n/a   
 
 
-
 
NC_013202  Hmuk_2276  binding-protein-dependent transport systems inner membrane component  36.83 
 
 
541 aa  257  4e-67  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_012029  Hlac_0167  binding-protein-dependent transport systems inner membrane component  37.6 
 
 
536 aa  216  7e-55  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.556719  normal 
 
 
-
 
NC_010718  Nther_2889  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
543 aa  211  2e-53  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_1924  binding-protein-dependent transport systems inner membrane component  34.44 
 
 
540 aa  208  2e-52  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2520  binding-protein-dependent transport systems inner membrane component  37.66 
 
 
530 aa  207  3e-52  Dickeya zeae Ech1591  Bacteria  normal  0.034918  n/a   
 
 
-
 
NC_013922  Nmag_1463  ABC transporter related protein  35.68 
 
 
1057 aa  206  6e-52  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009921  Franean1_5339  binding-protein-dependent transport systems inner membrane component  39.7 
 
 
509 aa  203  5e-51  Frankia sp. EAN1pec  Bacteria  normal  0.992663  normal  0.953855 
 
 
-
 
NC_014212  Mesil_2723  binding-protein-dependent transport systems inner membrane component  38.07 
 
 
530 aa  202  9.999999999999999e-51  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.5168 
 
 
-
 
NC_013595  Sros_8129  iron ABC transporter, permease protein  37.37 
 
 
502 aa  201  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.161316 
 
 
-
 
NC_009338  Mflv_3362  binding-protein-dependent transport systems inner membrane component  40.27 
 
 
511 aa  201  1.9999999999999998e-50  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.269197  normal  0.697364 
 
 
-
 
NC_013946  Mrub_2271  binding-protein-dependent transport systems inner membrane component  38.17 
 
 
523 aa  197  4.0000000000000005e-49  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.0000425777 
 
 
-
 
NC_009512  Pput_4762  binding-protein-dependent transport systems inner membrane component  36.72 
 
 
521 aa  196  1e-48  Pseudomonas putida F1  Bacteria  normal  0.109676  normal  0.504386 
 
 
-
 
NC_007777  Francci3_1591  binding-protein-dependent transport systems inner membrane component  37.53 
 
 
518 aa  195  1e-48  Frankia sp. CcI3  Bacteria  normal  0.543872  normal  0.457937 
 
 
-
 
NC_010676  Bphyt_4827  binding-protein-dependent transport systems inner membrane component  34.66 
 
 
534 aa  194  5e-48  Burkholderia phytofirmans PsJN  Bacteria  normal  0.232577  normal  0.0312056 
 
 
-
 
NC_002947  PP_4882  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
521 aa  194  5e-48  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1836  ABC Fe+3 transporter, inner membrane subunit  34.53 
 
 
534 aa  193  7e-48  Burkholderia xenovorans LB400  Bacteria  normal  0.374127  normal  0.533271 
 
 
-
 
NC_012880  Dd703_2429  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
527 aa  192  1e-47  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4938  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
521 aa  192  2e-47  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000107301 
 
 
-
 
NC_008463  PA14_62010  putative iron ABC transporter, permease protein  36.28 
 
 
512 aa  192  2e-47  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0428593 
 
 
-
 
NC_007492  Pfl01_2838  binding-protein dependent transport system inner membrane protein  34.85 
 
 
531 aa  191  2.9999999999999997e-47  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0606  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
536 aa  191  2.9999999999999997e-47  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1961  binding-protein-dependent transport systems inner membrane component  34.76 
 
 
526 aa  191  2.9999999999999997e-47  Mycobacterium sp. JLS  Bacteria  normal  0.80009  normal 
 
 
-
 
NC_008699  Noca_2021  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
522 aa  189  1e-46  Nocardioides sp. JS614  Bacteria  normal  0.0398286  n/a   
 
 
-
 
NC_008146  Mmcs_1981  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
526 aa  188  2e-46  Mycobacterium sp. MCS  Bacteria  normal  0.0924311  n/a   
 
 
-
 
NC_008705  Mkms_2027  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
526 aa  188  2e-46  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013158  Huta_1875  binding-protein-dependent transport systems inner membrane component  36.31 
 
 
545 aa  187  4e-46  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0530  binding-protein dependent transport system inner membrane protein  35.42 
 
 
521 aa  183  6e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.162719 
 
 
-
 
NC_010501  PputW619_4672  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
521 aa  181  2e-44  Pseudomonas putida W619  Bacteria  normal  normal  0.548778 
 
 
-
 
NC_011369  Rleg2_3782  binding-protein-dependent transport systems inner membrane component  31.93 
 
 
526 aa  181  2.9999999999999997e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.865045 
 
 
-
 
NC_013131  Caci_7420  binding-protein-dependent transport systems inner membrane component  36.08 
 
 
503 aa  180  5.999999999999999e-44  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.0090372  normal 
 
 
-
 
NC_008726  Mvan_3092  binding-protein-dependent transport systems inner membrane component  40.05 
 
 
514 aa  179  9e-44  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.923953  normal  0.633646 
 
 
-
 
NC_013235  Namu_1665  binding-protein-dependent transport systems inner membrane component  36.18 
 
 
515 aa  179  1e-43  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000100634  normal  0.0519495 
 
 
-
 
NC_009523  RoseRS_2293  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
557 aa  177  4e-43  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2857  binding-protein-dependent transport systems inner membrane component  33.26 
 
 
536 aa  176  9.999999999999999e-43  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.145655  normal 
 
 
-
 
NC_009767  Rcas_3172  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
540 aa  175  1.9999999999999998e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_6135  ABC transporter membrane spanning protein  33.07 
 
 
513 aa  173  5.999999999999999e-42  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3949  ABC Fe3+ transporter, inner membrane subunit  35.86 
 
 
532 aa  172  1e-41  Burkholderia sp. 383  Bacteria  normal  0.305187  normal  0.0483056 
 
 
-
 
NC_009953  Sare_1430  binding-protein-dependent transport systems inner membrane component  36.57 
 
 
511 aa  170  6e-41  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000545483 
 
 
-
 
NC_013173  Dbac_0741  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
550 aa  169  1e-40  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_4111  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
526 aa  168  2e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.43356  normal 
 
 
-
 
NC_012803  Mlut_06270  ABC-type Fe3+ transport system, permease component  35.08 
 
 
515 aa  168  2.9999999999999998e-40  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0952696  n/a   
 
 
-
 
NC_009719  Plav_0177  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
553 aa  166  1.0000000000000001e-39  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.445803 
 
 
-
 
NC_011138  MADE_00163  putative ABC-type transport system, permease component  33.18 
 
 
507 aa  165  2.0000000000000002e-39  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.452019  n/a   
 
 
-
 
NC_008261  CPF_0441  putative iron ABC transporter, permease protein  28.09 
 
 
533 aa  165  2.0000000000000002e-39  Clostridium perfringens ATCC 13124  Bacteria  normal  0.388151  n/a   
 
 
-
 
NC_008703  Mkms_5749  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
533 aa  163  7e-39  Mycobacterium sp. KMS  Bacteria  normal  normal  0.97601 
 
 
-
 
NC_009832  Spro_2535  binding-protein-dependent transport systems inner membrane component  33.63 
 
 
527 aa  161  2e-38  Serratia proteamaculans 568  Bacteria  normal  0.604854  normal 
 
 
-
 
NC_011886  Achl_0735  binding-protein-dependent transport systems inner membrane component  33.14 
 
 
530 aa  161  3e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_1588  binding-protein-dependent transport systems inner membrane component  27.51 
 
 
563 aa  157  3e-37  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008740  Maqu_1091  binding-protein-dependent transport systems inner membrane component  30.35 
 
 
562 aa  156  1e-36  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00794358  n/a   
 
 
-
 
NC_013456  VEA_002575  ferric iron ABC transporter permease protein  29.28 
 
 
541 aa  154  2.9999999999999998e-36  Vibrio sp. Ex25  Bacteria  normal  0.500484  n/a   
 
 
-
 
NC_009783  VIBHAR_03434  hypothetical protein  30.42 
 
 
541 aa  153  8e-36  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008687  Pden_4446  binding-protein-dependent transport systems inner membrane component  31.13 
 
 
550 aa  153  8e-36  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1358  binding-protein-dependent transport systems inner membrane component  33.14 
 
 
525 aa  153  8.999999999999999e-36  Pectobacterium wasabiae WPP163  Bacteria  normal  0.41308  n/a   
 
 
-
 
NC_009439  Pmen_0330  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
538 aa  153  8.999999999999999e-36  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2575  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
568 aa  150  4e-35  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0287363 
 
 
-
 
NC_010465  YPK_1462  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
528 aa  149  1.0000000000000001e-34  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0731  binding-protein dependent transport system inner membrane protein  29.92 
 
 
567 aa  149  1.0000000000000001e-34  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0677887  n/a   
 
 
-
 
NC_007643  Rru_A0768  binding-protein dependent transport system inner membrane protein  31.6 
 
 
558 aa  149  1.0000000000000001e-34  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1349  iron(III) ABC transporter, permease protein  33.18 
 
 
528 aa  149  1.0000000000000001e-34  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2920  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
525 aa  148  2.0000000000000003e-34  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.905105  n/a   
 
 
-
 
NC_010159  YpAngola_A2711  iron(III)-transport system permease  33.18 
 
 
528 aa  149  2.0000000000000003e-34  Yersinia pestis Angola  Bacteria  normal  0.0924971  normal  0.0430816 
 
 
-
 
NC_007498  Pcar_0894  ABC-type transport system, permease component  32.62 
 
 
553 aa  147  4.0000000000000006e-34  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000205423  n/a   
 
 
-
 
NC_008789  Hhal_1189  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
549 aa  145  1e-33  Halorhodospira halophila SL1  Bacteria  normal  0.217598  n/a   
 
 
-
 
NC_004578  PSPTO_0315  iron ABC transporter, permease protein  33.13 
 
 
538 aa  145  2e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5429  binding-protein dependent transport system inner membrane protein  33.74 
 
 
555 aa  145  2e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0325707 
 
 
-
 
NC_013757  Gobs_3649  binding-protein-dependent transport systems inner membrane component  34.5 
 
 
500 aa  145  2e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.974086  n/a   
 
 
-
 
NC_007802  Jann_0134  binding-protein-dependent transport systems inner membrane component  30.09 
 
 
558 aa  144  4e-33  Jannaschia sp. CCS1  Bacteria  normal  0.0921183  normal 
 
 
-
 
NC_012560  Avin_47290  iron ABC transporter, permease protein  33.26 
 
 
538 aa  144  4e-33  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0122  binding-protein-dependent transport systems inner membrane component  30.62 
 
 
559 aa  143  7e-33  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2094  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
562 aa  142  1.9999999999999998e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0551  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
567 aa  141  3e-32  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0989  iron transport system permease protein  31.52 
 
 
529 aa  140  4.999999999999999e-32  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1507  binding-protein-dependent transport systems inner membrane component  34.3 
 
 
555 aa  140  6e-32  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.665104  normal 
 
 
-
 
NC_009428  Rsph17025_1481  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
557 aa  140  7e-32  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.673481  normal 
 
 
-
 
NC_009654  Mmwyl1_3753  binding-protein-dependent transport systems inner membrane component  28.14 
 
 
554 aa  139  8.999999999999999e-32  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.104442 
 
 
-
 
NC_008700  Sama_0667  iron(III) ABC transporter, permease protein  30.46 
 
 
542 aa  139  1e-31  Shewanella amazonensis SB2B  Bacteria  normal  0.0603449  normal 
 
 
-
 
NC_002947  PP_5195  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
540 aa  138  3.0000000000000003e-31  Pseudomonas putida KT2440  Bacteria  normal  0.154251  normal 
 
 
-
 
NC_009720  Xaut_3763  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
582 aa  138  3.0000000000000003e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0163  putative iron(III) ABC transporter, fused inner membrane subunits  33.54 
 
 
557 aa  137  3.0000000000000003e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1546  ABC iron transporter, inner membrane subunit  28.6 
 
 
564 aa  137  5e-31  Psychrobacter arcticus 273-4  Bacteria  normal  0.424688  normal  0.358419 
 
 
-
 
NC_009512  Pput_5102  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
540 aa  137  6.0000000000000005e-31  Pseudomonas putida F1  Bacteria  normal  0.497984  normal 
 
 
-
 
NC_009049  Rsph17029_1797  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
557 aa  137  6.0000000000000005e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.406299 
 
 
-
 
NC_008463  PA14_68890  putative iron ABC transporter, permease protein  34.65 
 
 
539 aa  137  6.0000000000000005e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_2023  putative ABC transporter permease component  29.7 
 
 
559 aa  136  9.999999999999999e-31  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.967123  normal  0.0816083 
 
 
-
 
NC_009074  BURPS668_1377  iron ABC transporter permease  33.12 
 
 
570 aa  136  9.999999999999999e-31  Burkholderia pseudomallei 668  Bacteria  normal  0.300501  n/a   
 
 
-
 
NC_007298  Daro_1198  binding-protein dependent transport system inner membrane protein  30.85 
 
 
545 aa  135  1.9999999999999998e-30  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5255  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
540 aa  135  1.9999999999999998e-30  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0997  binding-protein-dependent transport systems inner membrane component  28.17 
 
 
543 aa  134  3e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.000511547 
 
 
-
 
NC_007969  Pcryo_1727  binding-protein-dependent transport systems inner membrane component  27.75 
 
 
561 aa  135  3e-30  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.368895 
 
 
-
 
NC_007510  Bcep18194_A4317  ABC spermidine/putrescine transporter, inner membrane subunit  31.01 
 
 
562 aa  134  3.9999999999999996e-30  Burkholderia sp. 383  Bacteria  normal  0.946485  normal  0.426161 
 
 
-
 
NC_007005  Psyr_0245  binding-protein dependent transport system inner membrane protein  32.02 
 
 
538 aa  133  7.999999999999999e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_0463  iron ABC transporter permease  32.26 
 
 
570 aa  133  7.999999999999999e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1510  ABC transporter, permease protein  32.26 
 
 
570 aa  133  7.999999999999999e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  0.896954  n/a   
 
 
-
 
NC_008836  BMA10229_A0689  iron ABC transporter permease  32.26 
 
 
570 aa  133  7.999999999999999e-30  Burkholderia mallei NCTC 10229  Bacteria  decreased coverage  0.000577033  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1181  iron ABC transporter permease  32.26 
 
 
570 aa  133  7.999999999999999e-30  Burkholderia mallei SAVP1  Bacteria  normal  0.881727  n/a   
 
 
-
 
NC_009656  PSPA7_5961  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
542 aa  133  7.999999999999999e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  0.727923  n/a   
 
 
-
 
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