More than 300 homologs were found in PanDaTox collection
for query gene Francci3_1591 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_1591  binding-protein-dependent transport systems inner membrane component  100 
 
 
518 aa  978    Frankia sp. CcI3  Bacteria  normal  0.543872  normal  0.457937 
 
 
-
 
NC_009921  Franean1_5339  binding-protein-dependent transport systems inner membrane component  85.74 
 
 
509 aa  750    Frankia sp. EAN1pec  Bacteria  normal  0.992663  normal  0.953855 
 
 
-
 
NC_008699  Noca_2021  binding-protein-dependent transport systems inner membrane component  59.13 
 
 
522 aa  485  1e-136  Nocardioides sp. JS614  Bacteria  normal  0.0398286  n/a   
 
 
-
 
NC_013757  Gobs_3649  binding-protein-dependent transport systems inner membrane component  62.34 
 
 
500 aa  483  1e-135  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.974086  n/a   
 
 
-
 
NC_008541  Arth_0606  binding-protein-dependent transport systems inner membrane component  53.29 
 
 
536 aa  475  1e-133  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2520  binding-protein-dependent transport systems inner membrane component  55 
 
 
530 aa  440  9.999999999999999e-123  Dickeya zeae Ech1591  Bacteria  normal  0.034918  n/a   
 
 
-
 
NC_007492  Pfl01_2838  binding-protein dependent transport system inner membrane protein  54.45 
 
 
531 aa  431  1e-119  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0735  binding-protein-dependent transport systems inner membrane component  53.1 
 
 
530 aa  430  1e-119  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011369  Rleg2_3782  binding-protein-dependent transport systems inner membrane component  49.4 
 
 
526 aa  422  1e-117  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.865045 
 
 
-
 
NC_012880  Dd703_2429  binding-protein-dependent transport systems inner membrane component  53.75 
 
 
527 aa  414  1e-114  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2711  iron(III)-transport system permease  52.29 
 
 
528 aa  412  1e-114  Yersinia pestis Angola  Bacteria  normal  0.0924971  normal  0.0430816 
 
 
-
 
NC_009708  YpsIP31758_1349  iron(III) ABC transporter, permease protein  52.5 
 
 
528 aa  414  1e-114  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1462  binding-protein-dependent transport systems inner membrane component  52.5 
 
 
528 aa  414  1e-114  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_4111  binding-protein-dependent transport systems inner membrane component  49.4 
 
 
526 aa  412  1e-113  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.43356  normal 
 
 
-
 
NC_009338  Mflv_2857  binding-protein-dependent transport systems inner membrane component  53.15 
 
 
536 aa  408  1.0000000000000001e-112  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.145655  normal 
 
 
-
 
NC_013421  Pecwa_1358  binding-protein-dependent transport systems inner membrane component  50.6 
 
 
525 aa  405  1.0000000000000001e-112  Pectobacterium wasabiae WPP163  Bacteria  normal  0.41308  n/a   
 
 
-
 
NC_008146  Mmcs_1981  binding-protein-dependent transport systems inner membrane component  49.9 
 
 
526 aa  402  1e-111  Mycobacterium sp. MCS  Bacteria  normal  0.0924311  n/a   
 
 
-
 
NC_008705  Mkms_2027  binding-protein-dependent transport systems inner membrane component  49.9 
 
 
526 aa  402  1e-111  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1961  binding-protein-dependent transport systems inner membrane component  50.6 
 
 
526 aa  402  9.999999999999999e-111  Mycobacterium sp. JLS  Bacteria  normal  0.80009  normal 
 
 
-
 
NC_012917  PC1_2920  binding-protein-dependent transport systems inner membrane component  51.55 
 
 
525 aa  397  1e-109  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.905105  n/a   
 
 
-
 
NC_011988  Avi_6135  ABC transporter membrane spanning protein  49.8 
 
 
513 aa  391  1e-107  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2535  binding-protein-dependent transport systems inner membrane component  51.67 
 
 
527 aa  390  1e-107  Serratia proteamaculans 568  Bacteria  normal  0.604854  normal 
 
 
-
 
NC_008703  Mkms_5749  binding-protein-dependent transport systems inner membrane component  51.77 
 
 
533 aa  389  1e-107  Mycobacterium sp. KMS  Bacteria  normal  normal  0.97601 
 
 
-
 
NC_010676  Bphyt_4827  binding-protein-dependent transport systems inner membrane component  51.88 
 
 
534 aa  386  1e-106  Burkholderia phytofirmans PsJN  Bacteria  normal  0.232577  normal  0.0312056 
 
 
-
 
NC_007952  Bxe_B1836  ABC Fe+3 transporter, inner membrane subunit  51.88 
 
 
534 aa  383  1e-105  Burkholderia xenovorans LB400  Bacteria  normal  0.374127  normal  0.533271 
 
 
-
 
NC_008463  PA14_62010  putative iron ABC transporter, permease protein  49.79 
 
 
512 aa  385  1e-105  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0428593 
 
 
-
 
NC_010501  PputW619_4672  binding-protein-dependent transport systems inner membrane component  48.71 
 
 
521 aa  379  1e-104  Pseudomonas putida W619  Bacteria  normal  normal  0.548778 
 
 
-
 
NC_010322  PputGB1_4938  binding-protein-dependent transport systems inner membrane component  47.63 
 
 
521 aa  379  1e-104  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000107301 
 
 
-
 
NC_002947  PP_4882  binding-protein-dependent transport systems inner membrane component  47.63 
 
 
521 aa  378  1e-103  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4762  binding-protein-dependent transport systems inner membrane component  47.12 
 
 
521 aa  377  1e-103  Pseudomonas putida F1  Bacteria  normal  0.109676  normal  0.504386 
 
 
-
 
NC_007492  Pfl01_0530  binding-protein dependent transport system inner membrane protein  49.25 
 
 
521 aa  355  1e-96  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.162719 
 
 
-
 
NC_013131  Caci_7420  binding-protein-dependent transport systems inner membrane component  49.08 
 
 
503 aa  350  3e-95  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.0090372  normal 
 
 
-
 
NC_007510  Bcep18194_A3949  ABC Fe3+ transporter, inner membrane subunit  49.49 
 
 
532 aa  344  2e-93  Burkholderia sp. 383  Bacteria  normal  0.305187  normal  0.0483056 
 
 
-
 
NC_013595  Sros_8129  iron ABC transporter, permease protein  46.74 
 
 
502 aa  296  8e-79  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.161316 
 
 
-
 
NC_009972  Haur_1721  binding-protein-dependent transport systems inner membrane component  41.44 
 
 
530 aa  295  2e-78  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.353247  n/a   
 
 
-
 
NC_009953  Sare_1430  binding-protein-dependent transport systems inner membrane component  46.57 
 
 
511 aa  275  1.0000000000000001e-72  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000545483 
 
 
-
 
NC_013946  Mrub_2271  binding-protein-dependent transport systems inner membrane component  41.79 
 
 
523 aa  272  8.000000000000001e-72  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.0000425777 
 
 
-
 
NC_012803  Mlut_06270  ABC-type Fe3+ transport system, permease component  43.32 
 
 
515 aa  271  2e-71  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0952696  n/a   
 
 
-
 
NC_008148  Rxyl_1174  binding-protein-dependent transport systems inner membrane component  42.23 
 
 
528 aa  271  2.9999999999999997e-71  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2417  binding-protein-dependent transport systems inner membrane component  36.83 
 
 
536 aa  270  5e-71  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0253396  normal  0.609444 
 
 
-
 
NC_013235  Namu_1665  binding-protein-dependent transport systems inner membrane component  42.2 
 
 
515 aa  267  4e-70  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000100634  normal  0.0519495 
 
 
-
 
NC_010718  Nther_2889  binding-protein-dependent transport systems inner membrane component  32.88 
 
 
543 aa  258  1e-67  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3362  binding-protein-dependent transport systems inner membrane component  41.54 
 
 
511 aa  253  4.0000000000000004e-66  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.269197  normal  0.697364 
 
 
-
 
NC_008726  Mvan_3092  binding-protein-dependent transport systems inner membrane component  41.98 
 
 
514 aa  246  6.999999999999999e-64  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.923953  normal  0.633646 
 
 
-
 
NC_013202  Hmuk_2276  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
541 aa  218  2e-55  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_014212  Mesil_2723  binding-protein-dependent transport systems inner membrane component  38.2 
 
 
530 aa  218  2.9999999999999998e-55  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.5168 
 
 
-
 
NC_009523  RoseRS_2293  binding-protein-dependent transport systems inner membrane component  34.28 
 
 
557 aa  207  5e-52  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_1924  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
540 aa  206  9e-52  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009767  Rcas_3172  binding-protein-dependent transport systems inner membrane component  34.31 
 
 
540 aa  204  4e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_0167  binding-protein-dependent transport systems inner membrane component  36.34 
 
 
536 aa  202  1.9999999999999998e-50  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.556719  normal 
 
 
-
 
NC_014158  Tpau_2071  binding-protein-dependent transport systems inner membrane component  39.31 
 
 
506 aa  187  3e-46  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_1463  ABC transporter related protein  35.77 
 
 
1057 aa  187  5e-46  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013440  Hoch_6602  binding-protein-dependent transport systems inner membrane component  37.25 
 
 
530 aa  183  7e-45  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.442605 
 
 
-
 
NC_013158  Huta_1875  binding-protein-dependent transport systems inner membrane component  35.39 
 
 
545 aa  173  7.999999999999999e-42  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0731  binding-protein dependent transport system inner membrane protein  28.21 
 
 
567 aa  161  3e-38  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0677887  n/a   
 
 
-
 
NC_011138  MADE_00163  putative ABC-type transport system, permease component  36.44 
 
 
507 aa  160  5e-38  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.452019  n/a   
 
 
-
 
NC_008340  Mlg_2575  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
568 aa  159  1e-37  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0287363 
 
 
-
 
NC_007498  Pcar_0894  ABC-type transport system, permease component  33.4 
 
 
553 aa  158  3e-37  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000205423  n/a   
 
 
-
 
NC_013173  Dbac_0741  binding-protein-dependent transport systems inner membrane component  29.23 
 
 
550 aa  158  3e-37  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1189  binding-protein-dependent transport systems inner membrane component  31 
 
 
549 aa  150  4e-35  Halorhodospira halophila SL1  Bacteria  normal  0.217598  n/a   
 
 
-
 
NC_009831  Ssed_0946  binding-protein-dependent transport systems inner membrane component  27.98 
 
 
543 aa  147  3e-34  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4446  binding-protein-dependent transport systems inner membrane component  31.05 
 
 
550 aa  147  7.0000000000000006e-34  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0997  binding-protein-dependent transport systems inner membrane component  26.92 
 
 
543 aa  145  2e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.000511547 
 
 
-
 
NC_009438  Sputcn32_3226  binding-protein-dependent transport systems inner membrane component  28.42 
 
 
544 aa  144  5e-33  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5429  binding-protein dependent transport system inner membrane protein  30.16 
 
 
555 aa  143  8e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0325707 
 
 
-
 
NC_008261  CPF_0441  putative iron ABC transporter, permease protein  23.85 
 
 
533 aa  142  1.9999999999999998e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  0.388151  n/a   
 
 
-
 
NC_011901  Tgr7_0454  binding-protein-dependent transport systems inner membrane component  28.82 
 
 
562 aa  140  3.9999999999999997e-32  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_004347  SO_0743  iron(III) ABC transporter, permease protein  28.86 
 
 
544 aa  140  6e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_1198  binding-protein dependent transport system inner membrane protein  30.62 
 
 
545 aa  140  7e-32  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0134  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
558 aa  139  2e-31  Jannaschia sp. CCS1  Bacteria  normal  0.0921183  normal 
 
 
-
 
NC_007963  Csal_0551  binding-protein-dependent transport systems inner membrane component  29.94 
 
 
567 aa  138  2e-31  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3626  binding-protein-dependent transport systems inner membrane component  28.17 
 
 
562 aa  138  2e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_012560  Avin_21310  ABC transporter, permease component  30.93 
 
 
575 aa  137  3.0000000000000003e-31  Azotobacter vinelandii DJ  Bacteria  normal  0.0856621  n/a   
 
 
-
 
NC_009428  Rsph17025_1481  binding-protein-dependent transport systems inner membrane component  31.73 
 
 
557 aa  137  4e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.673481  normal 
 
 
-
 
NC_008321  Shewmr4_3346  binding-protein-dependent transport systems inner membrane component  28.63 
 
 
544 aa  137  4e-31  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0122  binding-protein-dependent transport systems inner membrane component  30.06 
 
 
559 aa  137  5e-31  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_47290  iron ABC transporter, permease protein  30.96 
 
 
538 aa  136  8e-31  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1530  binding-protein-dependent transport systems inner membrane component  23.93 
 
 
550 aa  136  9.999999999999999e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  0.714891  n/a   
 
 
-
 
NC_007510  Bcep18194_A4317  ABC spermidine/putrescine transporter, inner membrane subunit  31.21 
 
 
562 aa  136  9.999999999999999e-31  Burkholderia sp. 383  Bacteria  normal  0.946485  normal  0.426161 
 
 
-
 
NC_009092  Shew_0862  binding-protein-dependent transport systems inner membrane component  29.2 
 
 
543 aa  135  9.999999999999999e-31  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0607  binding-protein-dependent transport systems inner membrane component  28.63 
 
 
544 aa  135  9.999999999999999e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3753  binding-protein-dependent transport systems inner membrane component  27.26 
 
 
554 aa  135  1.9999999999999998e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.104442 
 
 
-
 
NC_009012  Cthe_1586  binding-protein-dependent transport systems inner membrane component  22.66 
 
 
551 aa  135  1.9999999999999998e-30  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3516  binding-protein-dependent transport systems inner membrane component  27.97 
 
 
544 aa  135  1.9999999999999998e-30  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3763  binding-protein-dependent transport systems inner membrane component  30.37 
 
 
582 aa  135  1.9999999999999998e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_002575  ferric iron ABC transporter permease protein  24.8 
 
 
541 aa  134  3e-30  Vibrio sp. Ex25  Bacteria  normal  0.500484  n/a   
 
 
-
 
NC_008740  Maqu_1091  binding-protein-dependent transport systems inner membrane component  27.26 
 
 
562 aa  135  3e-30  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00794358  n/a   
 
 
-
 
NC_007969  Pcryo_1727  binding-protein-dependent transport systems inner membrane component  26.43 
 
 
561 aa  134  3.9999999999999996e-30  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.368895 
 
 
-
 
NC_008309  HS_0782  iron-uptake permease inner membrane protein  23.98 
 
 
555 aa  134  5e-30  Haemophilus somnus 129PT  Bacteria  normal  0.297135  n/a   
 
 
-
 
NC_007204  Psyc_1546  ABC iron transporter, inner membrane subunit  26.24 
 
 
564 aa  134  6e-30  Psychrobacter arcticus 273-4  Bacteria  normal  0.424688  normal  0.358419 
 
 
-
 
NC_009783  VIBHAR_03434  hypothetical protein  25 
 
 
541 aa  133  6.999999999999999e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_1597  binding-protein-dependent transport systems inner membrane component  26.72 
 
 
528 aa  133  7.999999999999999e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0870  binding-protein-dependent transport systems inner membrane component  26.43 
 
 
533 aa  132  1.0000000000000001e-29  Psychrobacter sp. PRwf-1  Bacteria  normal  0.0400876  hitchhiker  0.00000113394 
 
 
-
 
NC_009439  Pmen_0330  binding-protein-dependent transport systems inner membrane component  30.21 
 
 
538 aa  132  1.0000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0845  binding-protein-dependent transport systems inner membrane component  25.3 
 
 
543 aa  132  1.0000000000000001e-29  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0177  binding-protein-dependent transport systems inner membrane component  29.84 
 
 
553 aa  132  2.0000000000000002e-29  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.445803 
 
 
-
 
NC_011312  VSAL_I2587  iron(III) ABC transporter, permease protein  27.44 
 
 
543 aa  131  3e-29  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5195  binding-protein-dependent transport systems inner membrane component  31.09 
 
 
540 aa  130  4.0000000000000003e-29  Pseudomonas putida KT2440  Bacteria  normal  0.154251  normal 
 
 
-
 
NC_011662  Tmz1t_2589  binding-protein-dependent transport systems inner membrane component  28.73 
 
 
546 aa  130  4.0000000000000003e-29  Thauera sp. MZ1T  Bacteria  normal  0.677105  n/a   
 
 
-
 
NC_009052  Sbal_0602  binding-protein-dependent transport systems inner membrane component  27.51 
 
 
543 aa  130  5.0000000000000004e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
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