Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0607 |
Symbol | |
ID | 4257290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 708309 |
End bp | 709943 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121221 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_736667 |
Protein GI | 114046117 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTAG GATTAGCCAG AAGCTGGTCG CTTACTGGTT ATGCCATAGC CGCGCTACTG GTGTTACCCC TCTTTGCGTT AATTCTTCAG GCGGCGCAGC CCGATGAGGC CGTCTTTGGT CATCTGCTCT CCACTGTATT ACCCACATAT ATCTCCAACA GCCTTTGGTT GATCCTGTGG GTGAGTATTG GCTCACTCTT GCTGGCACTG CCCTGCGCTT GGTTAATGGC GCGCTGTGAG TTTGTCGCTA GGCGTTATCT GCAATGGGCC TTATTGCTCC CCTTGGCCAT GCCAGCCTAC ATTGTTGCCT ACGTGTATAC CGATTTACTC GATTACGCAG GCCCAGTGCA AACCGGGCTT CGCTCTGTGT TTGGTTGGAG TTCACCTCAG GATTACTTTT TCCCCGATAT TCGTACCTTA GGTGGCGCGG CGTGCGTGTT GTCGTTGGTG CTCTTTCCCT ATATTTATCT GTTGGCGCGT ACCGCGTTTA TGGAGCAATC CCTAAGCTTG GCCCACGCCT CGAGGATTAT GGGGTGCTCG CCGTGGCAGA GTTTTTGGCG TTTATCCTTA CCTATGGCAA GGCCCGCCTT GGCCGTGGGC GTGGCTTTAG TGGCGATGGA GACTGCGGCG GATTTTGCTA CGGTTAACTA CTTTGCCGTA CCTACCCTAA CTACAGCCGT GTATGACACT TGGCTGGGTT ATGGCAATTT GACTGCAGCG GCTAAGCTCT CGGCCATTAT CCTCTTGGTA GTGTTTAGTC TGATTGGAAT GGAACGTTTT GCTCGCCGTA AGCAGCAGTT ATTCCAAAAA CAGTCCCGTA TTCAAGCGAG CGATTTATAT CGGCTCTCAC CGATGCAAAC CCTGTTTGCC CTCGGCTATT GCATCACCTT GCTAGTGCTG GCCTTTGTGC TGCCAAGCGG GATTTTACTC TCCTATGCCA TCGATTATTT TGAGCAGAGC TGGGATCCGA TTTTCTGGCA ATTGAGCGTG AATAGTTTGA GCCTTGCTCT CATCACTAGC CTAGTGTGCT GCGCGATTGC ATTGATATTG ATGTTTATTC GCCGCGTGAG CCCAAGGCCG AGCGATGCGC TGCCATCACG TTTAGCATCG ACTGGCTATG CCTTGCCTGG TACAGTGCTC GCCATTGGCG TACTGGTGCC ATTAACGCTG CTCGATTTTG CGATCAACGA CTTAGCCGAT TGGTTGGGGA TGACAGGCCC AGGGCTTCTG TTTACGGGCA GTACAGTCGC GTTAGTTTTT GCCTTTTGTG TGCGCTTTGT GGCTATCGCC ATCGGCAGTG TGGAAACTAG CTATAAACGG ATTTCGCCGT CACTTGACAT GGTGAGCCTG ACCCTAGGAC AGGGCCCTAG ACGACTACTA CAAAGAGTGC ATCTGCCGTT GCTCACTAAG GGTTTATTTG CCGGGGCGCT GCTGGTGTTT ATCGAAAGCA TGAAAGAATT ACCGGCGGCA TTGTTGCTGC GGCCCATAGG GTTTGAGAAT CTCGCCACCT ATGTCTTCCA GTTTGTTTCA GACGAAAAGC TTGAACATGG CGCCTTGCCC GCCATTGTGA TTGTGCTCGT GGGGTTAGTC CCACTGATTT ATTTAAACCG TTCCTTGGAG CAAGATAGCC GATGA
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Protein sequence | MILGLARSWS LTGYAIAALL VLPLFALILQ AAQPDEAVFG HLLSTVLPTY ISNSLWLILW VSIGSLLLAL PCAWLMARCE FVARRYLQWA LLLPLAMPAY IVAYVYTDLL DYAGPVQTGL RSVFGWSSPQ DYFFPDIRTL GGAACVLSLV LFPYIYLLAR TAFMEQSLSL AHASRIMGCS PWQSFWRLSL PMARPALAVG VALVAMETAA DFATVNYFAV PTLTTAVYDT WLGYGNLTAA AKLSAIILLV VFSLIGMERF ARRKQQLFQK QSRIQASDLY RLSPMQTLFA LGYCITLLVL AFVLPSGILL SYAIDYFEQS WDPIFWQLSV NSLSLALITS LVCCAIALIL MFIRRVSPRP SDALPSRLAS TGYALPGTVL AIGVLVPLTL LDFAINDLAD WLGMTGPGLL FTGSTVALVF AFCVRFVAIA IGSVETSYKR ISPSLDMVSL TLGQGPRRLL QRVHLPLLTK GLFAGALLVF IESMKELPAA LLLRPIGFEN LATYVFQFVS DEKLEHGALP AIVIVLVGLV PLIYLNRSLE QDSR
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