Gene Shewmr7_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0607 
Symbol 
ID4257290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp708309 
End bp709943 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content52% 
IMG OID638121221 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_736667 
Protein GI114046117 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTAG GATTAGCCAG AAGCTGGTCG CTTACTGGTT ATGCCATAGC CGCGCTACTG 
GTGTTACCCC TCTTTGCGTT AATTCTTCAG GCGGCGCAGC CCGATGAGGC CGTCTTTGGT
CATCTGCTCT CCACTGTATT ACCCACATAT ATCTCCAACA GCCTTTGGTT GATCCTGTGG
GTGAGTATTG GCTCACTCTT GCTGGCACTG CCCTGCGCTT GGTTAATGGC GCGCTGTGAG
TTTGTCGCTA GGCGTTATCT GCAATGGGCC TTATTGCTCC CCTTGGCCAT GCCAGCCTAC
ATTGTTGCCT ACGTGTATAC CGATTTACTC GATTACGCAG GCCCAGTGCA AACCGGGCTT
CGCTCTGTGT TTGGTTGGAG TTCACCTCAG GATTACTTTT TCCCCGATAT TCGTACCTTA
GGTGGCGCGG CGTGCGTGTT GTCGTTGGTG CTCTTTCCCT ATATTTATCT GTTGGCGCGT
ACCGCGTTTA TGGAGCAATC CCTAAGCTTG GCCCACGCCT CGAGGATTAT GGGGTGCTCG
CCGTGGCAGA GTTTTTGGCG TTTATCCTTA CCTATGGCAA GGCCCGCCTT GGCCGTGGGC
GTGGCTTTAG TGGCGATGGA GACTGCGGCG GATTTTGCTA CGGTTAACTA CTTTGCCGTA
CCTACCCTAA CTACAGCCGT GTATGACACT TGGCTGGGTT ATGGCAATTT GACTGCAGCG
GCTAAGCTCT CGGCCATTAT CCTCTTGGTA GTGTTTAGTC TGATTGGAAT GGAACGTTTT
GCTCGCCGTA AGCAGCAGTT ATTCCAAAAA CAGTCCCGTA TTCAAGCGAG CGATTTATAT
CGGCTCTCAC CGATGCAAAC CCTGTTTGCC CTCGGCTATT GCATCACCTT GCTAGTGCTG
GCCTTTGTGC TGCCAAGCGG GATTTTACTC TCCTATGCCA TCGATTATTT TGAGCAGAGC
TGGGATCCGA TTTTCTGGCA ATTGAGCGTG AATAGTTTGA GCCTTGCTCT CATCACTAGC
CTAGTGTGCT GCGCGATTGC ATTGATATTG ATGTTTATTC GCCGCGTGAG CCCAAGGCCG
AGCGATGCGC TGCCATCACG TTTAGCATCG ACTGGCTATG CCTTGCCTGG TACAGTGCTC
GCCATTGGCG TACTGGTGCC ATTAACGCTG CTCGATTTTG CGATCAACGA CTTAGCCGAT
TGGTTGGGGA TGACAGGCCC AGGGCTTCTG TTTACGGGCA GTACAGTCGC GTTAGTTTTT
GCCTTTTGTG TGCGCTTTGT GGCTATCGCC ATCGGCAGTG TGGAAACTAG CTATAAACGG
ATTTCGCCGT CACTTGACAT GGTGAGCCTG ACCCTAGGAC AGGGCCCTAG ACGACTACTA
CAAAGAGTGC ATCTGCCGTT GCTCACTAAG GGTTTATTTG CCGGGGCGCT GCTGGTGTTT
ATCGAAAGCA TGAAAGAATT ACCGGCGGCA TTGTTGCTGC GGCCCATAGG GTTTGAGAAT
CTCGCCACCT ATGTCTTCCA GTTTGTTTCA GACGAAAAGC TTGAACATGG CGCCTTGCCC
GCCATTGTGA TTGTGCTCGT GGGGTTAGTC CCACTGATTT ATTTAAACCG TTCCTTGGAG
CAAGATAGCC GATGA
 
Protein sequence
MILGLARSWS LTGYAIAALL VLPLFALILQ AAQPDEAVFG HLLSTVLPTY ISNSLWLILW 
VSIGSLLLAL PCAWLMARCE FVARRYLQWA LLLPLAMPAY IVAYVYTDLL DYAGPVQTGL
RSVFGWSSPQ DYFFPDIRTL GGAACVLSLV LFPYIYLLAR TAFMEQSLSL AHASRIMGCS
PWQSFWRLSL PMARPALAVG VALVAMETAA DFATVNYFAV PTLTTAVYDT WLGYGNLTAA
AKLSAIILLV VFSLIGMERF ARRKQQLFQK QSRIQASDLY RLSPMQTLFA LGYCITLLVL
AFVLPSGILL SYAIDYFEQS WDPIFWQLSV NSLSLALITS LVCCAIALIL MFIRRVSPRP
SDALPSRLAS TGYALPGTVL AIGVLVPLTL LDFAINDLAD WLGMTGPGLL FTGSTVALVF
AFCVRFVAIA IGSVETSYKR ISPSLDMVSL TLGQGPRRLL QRVHLPLLTK GLFAGALLVF
IESMKELPAA LLLRPIGFEN LATYVFQFVS DEKLEHGALP AIVIVLVGLV PLIYLNRSLE
QDSR