| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0946 |
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| Symbol | |
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| ID | 5611155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1128657 |
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| End bp | 1130288 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931794 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001472685 |
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| Protein GI | 157374085 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTAG GTTTATCCAG AAGCTGGTCT TTTCTCGGTT ATCTGATCGC AGCAATCATC
ACATTACCAC TCGTTGCTAT AATCACTCAG GCACTGGTGC CTGATGAAGC GGTTTTTGCT
CACCTTCTCG AGACTGTGCT GCCTACCTAT GTCGCCAATA CTCTGTTATT GATGTTTTGG
GTTGGCTTGG GATCGCTCAT CATCGCAATT CCCGCTGCCT GGTTAGTGGC TAAGTGTCAT
TTCCCAGGAA GAAGAATATT TCAATGGGCG CTGTTACTTC CATTGGCGAT GCCGGCTTAT
GTGGTAGCTT ATGTTTATAC CGATCTGCTC GATTATGCGG GGCCGCTGCA AAAACTCTTG
CGTGAACTGT TTGCCTGGCA GTCGCCACAA GATTATTATT TTCCCGAGGT GAGGAGTTTA
GGTGGGGCAT CTTTGATGCT TTCTCTGGTC CTGTTTCCCT ACATCTATCT GCTCGCACGA
ACCACATTTA TGGAGCAATC CTCAAGCCTG CAGCACGCCG CTCGCGTCAT GGGGTGTGGT
CCATGGCGGA GTTTTTGGCA TCTGAGTCTC CCCATGGCAA GGCCTGCCTT AGCCGTCGGT
GTCGCACTCG TGGCGATGGA AACTGCTGCA GACTTTGCGA CCGTGAGCTA TTTTGCCGTG
CCCACCTTGA CCACAGCTGT GTATGATACT TGGCTCGAAT ATGGCAGCTT ATCTGCCGCC
GCCAAGCTCT CTGCCATCAT GTTACTTGTG GTTTTTTCCA TGATAGGCTT CGAGCGATTT
GCACGCAGAA AGCAACAACT CTTTCAAAAG CAAACGGGCG TTAATCAAGT AGAGCTATAT
CTGCTTAAGG GGATGAGGGC TAAGTTAGCC AGCGGTTATT GTAGCGCATT ACTTTTTTTC
TCATTTCTGC TGCCATTTAT TATCTTACTT CAATATGCGT GGGAGTATTT CGATCAGAGC
TGGAGTAGTG CTTTCTGGGA ATATAGTCTG AACAGTCTAT ATATCTCAGG GATAGTCAGT
GTCATTGCGG TTTTCATCGG TGTGCTCTTG ATGTTTATTC GCCGAATAAG TCCAAGGAGA
GCGGATCTCC TTCCCTCGCG TTTTGCCTCT ACGGGATATG CACTACCGGG AACTGTTTTG
GCTATCGGTA TTTTAGTGCC GCTAACCTAT CTCGATTTCG CGGTGAACGA TCTTTATGAG
TACTTGGGTC ATCGAGGCCC GGGGTTAATA TTTACCGGTA GTGTATTTGT TCTCATCTTC
GCTTTTTGTA TCCGGTTCTC CGCTATAGCT ATCGGCAGTG TCGAAAGTAG TTATAAGCGC
ATCTCGCCGT CTCTGGATAT GGCTGCTATC ACCATGGGCT TAAAACCGAG GTCGCTATTA
TGTCGAGTTC ATATCCCCCT GTTGAGGCGG GGCATATTTG CCGGGTTATT GCTGGTGTTT
ATTGAGTGTA TGAAAGAGTT ACCCGCAGCC TTGCTTCTCA GACCTGTCGG ATTTGAAAAT
CTGGCGACCT ATGTTTTTCA ATTTGTTTCA GATGAGCAGT TGGAACATGG TGCGCTGGCC
GCAATTGTTA TTGTATTGGT GGGTTTAGTC CCGCTTATCT ATCTCAATCG CTCTTTGGAA
CAAGAAAGCT AA
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| Protein sequence | MILGLSRSWS FLGYLIAAII TLPLVAIITQ ALVPDEAVFA HLLETVLPTY VANTLLLMFW
VGLGSLIIAI PAAWLVAKCH FPGRRIFQWA LLLPLAMPAY VVAYVYTDLL DYAGPLQKLL
RELFAWQSPQ DYYFPEVRSL GGASLMLSLV LFPYIYLLAR TTFMEQSSSL QHAARVMGCG
PWRSFWHLSL PMARPALAVG VALVAMETAA DFATVSYFAV PTLTTAVYDT WLEYGSLSAA
AKLSAIMLLV VFSMIGFERF ARRKQQLFQK QTGVNQVELY LLKGMRAKLA SGYCSALLFF
SFLLPFIILL QYAWEYFDQS WSSAFWEYSL NSLYISGIVS VIAVFIGVLL MFIRRISPRR
ADLLPSRFAS TGYALPGTVL AIGILVPLTY LDFAVNDLYE YLGHRGPGLI FTGSVFVLIF
AFCIRFSAIA IGSVESSYKR ISPSLDMAAI TMGLKPRSLL CRVHIPLLRR GIFAGLLLVF
IECMKELPAA LLLRPVGFEN LATYVFQFVS DEQLEHGALA AIVIVLVGLV PLIYLNRSLE
QES
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