| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0862 |
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| Symbol | |
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| ID | 4920705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 982914 |
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| End bp | 984545 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162395 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001092993 |
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| Protein GI | 127511796 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTAG GCTTTCCCAA ATCCTGGTCG ACCCTAAGTT ATCTGACCGC CATCTGCTTC
GCCCTGCCCC TGGGAGCCAT CTGCATACAG GCAATGGTGC CAGATGAGGC GGTATTCGGT
CACCTGATGC AAACCGTTCT GCCGACCTAT ATTTTCAACA CCTTGGCCTT GATGTTGTTT
GTCAGCCTAG GCGCCTTGCT GATTGCCGTG CCCGCCGCCT GGTGCGTGGC CCGCTGTGAT
TTTCCCGGGC GCAATGGGTT TCAGTGGGCG CTGCTGCTGC CACTGGCCAT GCCCGCCTAT
GTGGTGGCCT ATGTCTATAC GGATCTCCTA GACTATGCCG GGCCGATTCA GACTTGGCTG
CGGCAAGTTA ATGGCTGGCT GTCGCCTACG GATTATTACT TTCCCGATGT GCGCACCCTG
GGGGGCGCGT CTGTGATGCT GGCACTGGTG CTGTTTCCCT ATATCTATCT GCTGGCGCGC
ACCGCCTTCA TGGAGCAGTC GCCAAGCCTG CTGCACGCCT CCAGAGTGAT GGGCGCAGGG
CCCTGGCGCA GTTTCTGGCG CCTGAATTTG CCGATGGCGC GGCCCGCCTT GGCGGTGGGG
GCGGCGCTGG TGGCGATGGA GACGGCTGCC GATTTCGCTA CCGTCAGCTA CTTTGCCGTG
CCTACCTTGA CGACGGCGGT CTATGATACC TGGCTGGGAT ACGGCAGTCT GGCGGCGGCA
GCTAAACTCT CAGCCATCAT ACTGCTGGTG GTCTTCTGTC TGATCGGCGC CGAGCGTTTT
GCCCGGCGTA AACAGCAGCT GTTTCAGAAA CAGACGCCGA TAACCTCCCA CGAACGATAT
GCGCTCTCGG GTGTTAAGGC CTGGCTCGCT GCGGGCTATT GCGCTGTGCT GCTGCTGTTG
GCCTTCGGCC TGCCTGTTTG GGTCTTGCTG GGGTATGCCT GGGATTACTT TGATGTCAGT
TGGAATCAGG CCTTCTGGGA ATACAGTCTT AACAGCCTGA TCATTGCCCT GGTGGTTAGT
CTAGTCACTG TGGTGTTCGC CTTGCTCTTG ATGTTTGTCC GGCGCTGCAG TCCAAGAAAA
ATCGATATCC TGCCTTCACG CCTGGCCTCG ACGGGCTATG CCCTGCCGGG TACTGTGCTG
GCGATAGGCG TCTTGGTGCC TCTGAGTCTT CTTGATTTCG CGGTCAACGA TCTCTATGCC
TATTTCGACC AGAGTGGGCC AGGGCTTATC TTCAGTGGCA CCCTGTTTGT GTTAATTTTT
GCCTTTGCGA TCCGCTTTGC CGCCATCGCC ATCGGCAGCA TAGAAAACAG CTATAAGCAG
ATCAGCCCCT CGCTGGACAT GGCATCGGTC ACCATGGGGA TGAGGCCTAG TGCCATTCTA
TCGCGGATCC ATCTACCACT GCTTCGCAGC GGCATTTTTG CCGCCATCTT GCTGGTCTTT
ATCGAGTGTA TGAAGGAGTT GCCGGCGGCT TTGCTGCTCA GGCCCGTGGG GTTTGAGAAT
CTCGCCACCT ATGTCTATCA GTTTGTCTCA GACGAACAGC TCGAGCAGGG CGCCCTGGGG
GCCATAGTGA TCGTCTTGGT GGGGCTGATC CCGCTTATCT ATCTCAATCG CTCCTTGGAG
CAAGGTAACT AG
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| Protein sequence | MILGFPKSWS TLSYLTAICF ALPLGAICIQ AMVPDEAVFG HLMQTVLPTY IFNTLALMLF
VSLGALLIAV PAAWCVARCD FPGRNGFQWA LLLPLAMPAY VVAYVYTDLL DYAGPIQTWL
RQVNGWLSPT DYYFPDVRTL GGASVMLALV LFPYIYLLAR TAFMEQSPSL LHASRVMGAG
PWRSFWRLNL PMARPALAVG AALVAMETAA DFATVSYFAV PTLTTAVYDT WLGYGSLAAA
AKLSAIILLV VFCLIGAERF ARRKQQLFQK QTPITSHERY ALSGVKAWLA AGYCAVLLLL
AFGLPVWVLL GYAWDYFDVS WNQAFWEYSL NSLIIALVVS LVTVVFALLL MFVRRCSPRK
IDILPSRLAS TGYALPGTVL AIGVLVPLSL LDFAVNDLYA YFDQSGPGLI FSGTLFVLIF
AFAIRFAAIA IGSIENSYKQ ISPSLDMASV TMGMRPSAIL SRIHLPLLRS GIFAAILLVF
IECMKELPAA LLLRPVGFEN LATYVYQFVS DEQLEQGALG AIVIVLVGLI PLIYLNRSLE
QGN
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