| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0122 |
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| Symbol | |
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| ID | 4078727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 129006 |
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| End bp | 130685 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005409 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612117 |
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| Protein GI | 99079963 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACG CAAGCCAGAC CCAAGCGCCA GCTCCTCGCC GTAAAACCTC TGCGCGCATC
AAAGGCGCGC GGCGGTTCCA GGTGGTGGCA TGGGTGGTGG CAATCGCGTG CCTTTTGCCG
ATGGCTGCAG TCGCGATCGC AGCCCTGACG GGCGGGGTGG AGACGATCAC GCATCTTGGC
CAAACCGTGC TGCCCCGCTA CGCGCGCACA ACGGTGTATC TGGTACTGCT GGTGTCACTT
GGGACCTTTT CCATCGGGGT CGGGGCCGCG TGGCTGGTGA CAATGACGCG CTTTCCCGGT
GCACGGTTCT TTGAGATCGC GCTGGTACTG CCCCTGGCTT TTCCGGCTTA TGTGCTGGCT
TATGGCTATA CGTTCCTTCT CGATCATCCG GGCATCGTGC AGACAACTTT GCGCGAGGTG
ACAGGCTGGG GGCCGCGAGA CTACTGGTTC CCTGAAATCC GCTCGCTTGG GGGGGCGGCG
CTGATGCTTG TTCTGGTGCT CTACCCCTAT GTCTATCTTC TGGCGCGCGC CGCCTTCCTG
CAACAAAGCG CCTCTGCATT CCTCGCGGCG CGGGCGCTTG GCGACAGCTC GTGGCGAGCG
TTCTGGCGTG TGAGCCTGCC AATGGCACGC CCTGCGGTGG CTTCGGGTGT TCTCTTGACG
GTGATGGAGA CCATCGCAGA CTATGGCACG GTCGCCTACT TCGGGGTGCA GACCTTTGCT
ACGGGTATCT ACACCAGCTG GTTTTCGATG GCGGATCGCG CCGGTGCGGC GCAGTTGGCG
CTATGCTTGT TGGGGTTTGC GCTGATGCTT GCGGTTGCAG AGCGCATCAG TCGTGGCCGC
GCCCGCTATC ACCACGCAGG CAAGCAACAG GCTGCTTTGC CCCCGGCCAC GCTGTCGCGG
GGAAAAGCGG CAGGGGCAAT CATCCTCTGC GCGCTGCCGG TTGTGTTTGG GTTCCTCGTG
CCGCTCATAA GCTTGACCCT GATGGGATTG AACTCGGAGC AGAACCTCTT GAGCCGCCGC
TATATTTCCT TCATCACCAA CTCGTTGACC TTGGCCAGCA CGGCTGCCGT GGTCACGCTT
CTGGCTGCAG TCTGCCTTGG GTTTTATCAA CGTCTGAAAC CGGGACGCCT GTCGAGCACG
GCGGCCAATG TTTCGCGGCT CGGCTATGCG GTGCCCGGTG GTGTGATCGC GGTTGGTCTC
ATGGTGCCAT TTGCCGCCTT CGACAATGCG CTTGATGCTT GGATGCAGGC CAATTTCGGC
CTGCGTACCG GGCTTTTGGT GACGGGCTCG ATCTGGCTCT TGGTGGTGGC CTATATGGTG
CGCTTCATGG CGGCCGCGCT TGGCGCATAT GAGGGCGGAC AGGCGACAGT ACATGCAAAT
ATGGATGCAG CGGCACGGTC ATTGGGGCAG AGCCCATTGG GCATGCTGCG CCGCGTGCAT
CTGCCGATCC TGACACCCAG CCTTTTGACA GCCTTGCTGA TAGTTTTTGT GGACGTGATG
AAGGAGCTGC CCGCGACTTT GATCATGCGC CCCTTCAACT TCGACACTCT TGCGGTGCAG
GCGCATCGGT TAGCGGCGGA TGAGCGGCTC GAGGGCGCGG CGGTGCCCTC TCTTGTGATC
ATGGCCGTTG GACTGTTGCC CGTGATCCTG GTGTGTCGTC AGGTCCGGCG GCGCAGTTAG
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| Protein sequence | MTHASQTQAP APRRKTSARI KGARRFQVVA WVVAIACLLP MAAVAIAALT GGVETITHLG
QTVLPRYART TVYLVLLVSL GTFSIGVGAA WLVTMTRFPG ARFFEIALVL PLAFPAYVLA
YGYTFLLDHP GIVQTTLREV TGWGPRDYWF PEIRSLGGAA LMLVLVLYPY VYLLARAAFL
QQSASAFLAA RALGDSSWRA FWRVSLPMAR PAVASGVLLT VMETIADYGT VAYFGVQTFA
TGIYTSWFSM ADRAGAAQLA LCLLGFALML AVAERISRGR ARYHHAGKQQ AALPPATLSR
GKAAGAIILC ALPVVFGFLV PLISLTLMGL NSEQNLLSRR YISFITNSLT LASTAAVVTL
LAAVCLGFYQ RLKPGRLSST AANVSRLGYA VPGGVIAVGL MVPFAAFDNA LDAWMQANFG
LRTGLLVTGS IWLLVVAYMV RFMAAALGAY EGGQATVHAN MDAAARSLGQ SPLGMLRRVH
LPILTPSLLT ALLIVFVDVM KELPATLIMR PFNFDTLAVQ AHRLAADERL EGAAVPSLVI
MAVGLLPVIL VCRQVRRRS
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