| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1358 |
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| Symbol | |
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| ID | 8529747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1484123 |
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| End bp | 1485700 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003258770 |
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| Protein GI | 261820664 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.41308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACG TTAGCTACAG CGAAACTACG ACCTCCACCG CTTCTTCTCC GCCATTACGC
AAGCCTATCG CGTTGCTTGC GATCGTCGCG TTGGTATTAT CCCTACTGGG CTTTGTCCCG
TTGGGTTTTG TGATTGGCGT CAGTATTGAT ACCGGCTGGG AAACCGCTCG TGCCCTGTTA
TTCCGCCCAC GAGTTGGCGA GCTTCTCATC AATACGGTAC TGCTGGTTGT CCTAACGCTG
CCGATTTGTA CCGTTCTCGG CGTGTTGTTA GCTTGGCTAA CGGAACGAAC CACCCTGCCC
GCGCGACGCC TGTGGTCGTT GTTACTGACC GCGCCGCTGG CAATCCCCGC ATTTGTACAA
AGCTACGCCT GGATCAGTAC CGCCCCCAGT CTACATGGTC TACCCGCTGG CGTATTTTTA
TCGGTCATCG CCTACTTACC GTTTCTTTAT TTACCCTGCG CCGCGACGCT TCGGCGTCTT
AATCCTGCGT TGGAAGATGT TGCGGCTACG CTGGGTGTAC CTCCGGTTAC CGTGTTTTTC
CGCGTGGTGT TACCGCAGTT AAAGCTGGCC ATCGGCGGCG GATTGCTGCT GATTGCCCTG
CATTTACTAG CGGAGTATGG CCTGTTCGCC ATGATCCGTT TCGATACCTT TACTACCGCC
ATTTTCGATC AGTTTCAGTC AACGTTTAAT GGCCCAGCCG CCAACATGCT GGCTGGCGTG
CTGGCACTGC TGTGCCTGTT TCTATTGTGT GCGGATGCCC GCATACGTGG CGTCACGCGC
TATGCGCATG TCGGTTCTGG CGCGCCACAG GTTGTCACAC CGATACGCTT ATCACCGCTT
TCTCTCTCGC TGGCGCTGCT GTTACTGGCA ACGCTGGTGC TACTGACACT CGGCGTACCT
TTTATTACGC TGTCTCGCTG GCTGTGGTTT GGCGGCTGGG AAGTGTGGCA GCGGCATGAG
TTACTTGATG CATTTCGCCA GACCATGATG CTAGCGCTGA GCGGTGCTGC ACTGACGACG
CTGGCAGCGA TCCCGATGGC CTGGCTGACC ATCCGCCACC CTAATCGCCT GTATCGATTT
TTGGAAGGAT GCAATTACAT CACCAGCTCT CTGCCGGGTA TCGTTGTCGC GCTGGCGCTG
GTAACCACCA CAATTCACGT CATCAGGCCG CTCTACCAGA CCGAGTTCAC CGTGCTGTTG
GCTTATCTGC TGATGTTCAT GCCACGAGCG CTGGTTAATC TACGTGCGGG TATCGCACAG
GCACCGGTAG AGTTAGAACA GGTTGCTGCC AGTCTGGGTC GTTCCCCCTT GCAGACGTTA
ATGACCGTGA CTATTCGGCT GGCTGCACCC GGCGTCGCCA CAGGGGCAAC GCTCGTTTTT
CTGGCCATCA TCAATGAGCT AACCGCCACG CTGCTGCTGG CACCCAACGG CACGCGCACG
CTGGCAACCG GATTTTGGGC GCTAACCAGT GAGATTGACT ATCCTGCGGC GGCACCTTAC
GCGCTGATTC TGATCTTACT GTCGCTACCG TGGACCTGGT TTCTCTACAC GCAATCACAA
AAAATGGCGG GGCTGTAA
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| Protein sequence | MTNVSYSETT TSTASSPPLR KPIALLAIVA LVLSLLGFVP LGFVIGVSID TGWETARALL
FRPRVGELLI NTVLLVVLTL PICTVLGVLL AWLTERTTLP ARRLWSLLLT APLAIPAFVQ
SYAWISTAPS LHGLPAGVFL SVIAYLPFLY LPCAATLRRL NPALEDVAAT LGVPPVTVFF
RVVLPQLKLA IGGGLLLIAL HLLAEYGLFA MIRFDTFTTA IFDQFQSTFN GPAANMLAGV
LALLCLFLLC ADARIRGVTR YAHVGSGAPQ VVTPIRLSPL SLSLALLLLA TLVLLTLGVP
FITLSRWLWF GGWEVWQRHE LLDAFRQTMM LALSGAALTT LAAIPMAWLT IRHPNRLYRF
LEGCNYITSS LPGIVVALAL VTTTIHVIRP LYQTEFTVLL AYLLMFMPRA LVNLRAGIAQ
APVELEQVAA SLGRSPLQTL MTVTIRLAAP GVATGATLVF LAIINELTAT LLLAPNGTRT
LATGFWALTS EIDYPAAAPY ALILILLSLP WTWFLYTQSQ KMAGL
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