| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3753 |
|---|
| Symbol | |
|---|
| ID | 5365386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 4231357 |
|---|
| End bp | 4233021 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640806136 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001342589 |
|---|
| Protein GI | 152997754 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.104442 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATT TAGCTCCCCC GAGTGTAGTA AGTAAGTCTA AGTGGAATTG GTTAAAAATG
GCGGCAATGC TTATTGCCGC CATTTTGGCA TTACCTATCT TGGTTGTTTT GGTTAATGTT
TTGATCGGTG ATGGTGAAGT GTGGCGACAC CTTTATCAGA CAGTCTTAGC TGAATACATT
TCTAACTCCT TGTTACTGAT GTTGGGGGTT GGCATTGGCG TGCTGGTTAT CGGTGTGCCT
TGCGCTTGGT TGACTAGCAT GTGTGATTTC CCCGGTCGCA CCTTACTATC TTGGGCCTTG
CTTTTGCCAA TGGCCGTGCC TGCTTACATT ATTGCTTATA CCTACACGGG GGTATTGGAT
TTTGCAGGTC CTGTACAAAC TTTTATTCGC GAGCTTACGG GTTGGCGTTA CGGTGAGTAT
TGGTTCTTTG AAATACGTTC CCTTGGTGGC GCCATAGCTA TGCTGACCTT GGTTCTCTAC
CCTTATGTGT ATCTCATGAG CCGAGCGGCT TTTTTAGAGC AGTCTGAGAA CACCTTAGAA
GTTAGTCGCA CACTTGGCTA TTCTGGTCGC GCGGTATTTT TCAAATTGGC ACTTCCCCTT
GCTCGTCCGG CGATAGTAAC AGGCCTTACC TTAGCGCTTA TGGAGACATT GGCGGATTAT
GGTACGGTGC AATATTTCAG TGTAAATACT TTCACAACGG GCATTTTACG AACCTTTTAT
GGATTTGGTG ATATCGCAGC TGCTTCTCAG CTGGCAGGTA TTTTACTGAT GTTCGTGGCG
GTGTTGATTC TGCTAGAACG ATATTCTCGG CATCGCATTC GTTATCATGC ATCAGGTCTA
AAAAAGGCCA GTAATCGGCG TATGATTTTG AAAGGTAGTC GTGGCTTTAT AGCGTGCCTT
TTTTGCTTGC TGCCTATTCT TGTTGGCTTT CTTATTCCCG TAGGTGTGTT GGCGTATTGG
GCGGTATTTA AAGCAGAAAT GCCCGGCGCG AACTTTATTC AACTGGCGTG GAACTCGTTT
TATCTAGCGG CTATGGCTTC ACTTATTGTG GTGAGTTTAG CCTTGATATT GAGTTACGCT
ATTCGTTTAA ATAATGGTAA AGCGGTGAGG ACATCTGTAG GCATTGCGGG ATTAGGTTAT
GCCTTACCGG GGACTATTAT CGCGATTGGC ACTATTGTTC CTCTAGCTTG GTTGGACCAT
CGAATTATTG ATTTGGTTAA ACATTACAGT GGGGAAAGAG TCGGTTTATT TTTTTCTGGC
ACATTAGTAG CGTTGCTGTT TGCTTACACT GTTCGTTTTA TGGCGGTATC TTTAGGGGCG
GTTCAAAATG GACTTGGAAA GATTAAACCC AGTATGGATA TGGCAGGACG TTCGCTCGGT
ATGTCGCCTT TTAAAGTGTT AACCCGTATT CATATTCCAC TTTTAAAAGG GTCTGCTCTT
ACGGCAATAC TGATCGTCTT TGTCGATGTA TTAAAAGAAT TGCCAGCCAC TTTGGTATTA
CGACCATTTA ACTTTAATAC GTTAGCGGTG CGAGCTTTTG AATTGGCGTC AGATGAGCGA
CTGGTCGATG CGGCTCCTGC TTCGTTAATG ATAGTGCTGG TGGGGCTGGT GCCAGTGATT
TTGTTGAGTC GTTCCATTTC TTCTCACCTG AATAAATCTA AATAG
|
|---|
| Protein sequence | MANLAPPSVV SKSKWNWLKM AAMLIAAILA LPILVVLVNV LIGDGEVWRH LYQTVLAEYI
SNSLLLMLGV GIGVLVIGVP CAWLTSMCDF PGRTLLSWAL LLPMAVPAYI IAYTYTGVLD
FAGPVQTFIR ELTGWRYGEY WFFEIRSLGG AIAMLTLVLY PYVYLMSRAA FLEQSENTLE
VSRTLGYSGR AVFFKLALPL ARPAIVTGLT LALMETLADY GTVQYFSVNT FTTGILRTFY
GFGDIAAASQ LAGILLMFVA VLILLERYSR HRIRYHASGL KKASNRRMIL KGSRGFIACL
FCLLPILVGF LIPVGVLAYW AVFKAEMPGA NFIQLAWNSF YLAAMASLIV VSLALILSYA
IRLNNGKAVR TSVGIAGLGY ALPGTIIAIG TIVPLAWLDH RIIDLVKHYS GERVGLFFSG
TLVALLFAYT VRFMAVSLGA VQNGLGKIKP SMDMAGRSLG MSPFKVLTRI HIPLLKGSAL
TAILIVFVDV LKELPATLVL RPFNFNTLAV RAFELASDER LVDAAPASLM IVLVGLVPVI
LLSRSISSHL NKSK
|
|---|
| |