| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4938 |
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| Symbol | |
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| ID | 5872753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5508690 |
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| End bp | 5510255 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550076 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001671158 |
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| Protein GI | 167035927 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000107301 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGCCG CCCTGTCCGA ACCGGCGCCG GTACGCTTCG TTCCGCGCCG CAAGCGCCCG
TCCATCTGGG TGGTGCTGCC TGTGCTGTTC CTGGTGGCGA TGAGCTTGCT GCCACTGGCT
TACGTCGCCA TCAAAGCCTG GGAAGCAGGC TGGCGCGAAG CCTTGCACCT GCTGTGGCGC
CCCTTTGTCT GGGGGCTGAT GCGCAACACC CTGATGCTGA TGGTCGGGGT GACGCTGACC
TGCATGGTGG TCGGCCTGGC GCTGGCCTGG TTGCTGGAGC GCAGCAACCT GGCCGGCCGT
CGGCTGTGGG GCGTGGTGTT GTGCCTGCCG TTCGCCGTGC CATCGTTCGT CAGCAGCTTC
ACCTGGGTGT CGCTGAGCTC GGACTTCGAA GGCCTTGGTG GGGCGATCAT GGTCATGGCC
CTGTCCAAGT ACCCGCTGGT GTTCCTGCCC GTTGCCGCGA CCCTGCGCAA CCTCGACACC
TCGCTTGAGG AATCGGCGCG CACCCTGGGC TGCAGCCGCT GGGGCGTGTT CAGCAAGGTC
ACCCTGCCGC TGCTGTGGCC GTCGATGCTC GGTGGTGCGC TACTGATTGC CCTGCATATG
CTGGTGGAGT TTGGCGCGCT GTCGATCCTA GGCCTGCAGA CGTTCACCAC GGCCATCTAC
CAGCAGTTCG AACTGGAGTT CAGCAATGCC AACGCGGCCA TGCTGTCTGC TGTGCTGCTG
GCGATGTGCC TGGTGATGCT TTGGTTGGAA CTGCGCGTAC GCGGCAAAGC CCGCCATGTG
CGCATCGGCC AAGGCGTAGC GCGGCGCGCG CAACCCGTGC GGCTGCGGGG CTGGGCGGTG
CTGGCGCAGC TGTTCTGCAT TGGCCTGGCA GTGCTGGGCA GCGGTATTCC GCTGGCCATG
CTCGGCTACT GGCTTAGCGT CGGTTCATCG GCAGCGTTCC CGGTGGCAGC CATTTCCAAG
GCGCTGTTCA CTTCGCTGTC GGTGTCACTT GGCGGTGCAG GTTTCTGTGT GTTGCTGGCC
CTGCCGATCA GCTTCCTGGT GGTACGTTAC AAAGGTCGCC TGGCGATCTG GGCCGAGCGC
CTGCCGTACC TGTTGCACGC CCTCCCCGGC CTAGTGATTG CCCTGACCTT GGTGTTCTTC
GCCCTGCACT ACGTGCCGGC GCTGTACCAG ACCACGGCAT TGCTGCTGCT GGCTTATGCG
CTGCTCTTCT TGCCATTGGC CCAGTCGCCA GTGCGCACCG CGCTGAACAA GGCCTCGCCG
ACGCTGGAGG AAGCCGCGCG CACGCTGGGT GCCAACAGCT TCGCGGCGTT CTGCCGGGTG
ACCTTGCCAA TCATCTTCCC AGCCATGGCG GCAGCGTTTG CGCTGGTGTT CCTGGATGCC
ATGAAAGAGC TGACCGCTAC CCTGCTACTG AGCCCGACCG GGATGACCAC CCTGGCGACC
GAGGTATGGG CACACACCGC CAACGTCGAA TTCGCCGCAG CGGCGCCTTA TGCGGCATTG
CTGATCGTGG TGTCGGGGTT GCCGGTTTAT CTGCTGACCA CGCGGATGTA CCTGAACAAG
GCATGA
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| Protein sequence | MTAALSEPAP VRFVPRRKRP SIWVVLPVLF LVAMSLLPLA YVAIKAWEAG WREALHLLWR
PFVWGLMRNT LMLMVGVTLT CMVVGLALAW LLERSNLAGR RLWGVVLCLP FAVPSFVSSF
TWVSLSSDFE GLGGAIMVMA LSKYPLVFLP VAATLRNLDT SLEESARTLG CSRWGVFSKV
TLPLLWPSML GGALLIALHM LVEFGALSIL GLQTFTTAIY QQFELEFSNA NAAMLSAVLL
AMCLVMLWLE LRVRGKARHV RIGQGVARRA QPVRLRGWAV LAQLFCIGLA VLGSGIPLAM
LGYWLSVGSS AAFPVAAISK ALFTSLSVSL GGAGFCVLLA LPISFLVVRY KGRLAIWAER
LPYLLHALPG LVIALTLVFF ALHYVPALYQ TTALLLLAYA LLFLPLAQSP VRTALNKASP
TLEEAARTLG ANSFAAFCRV TLPIIFPAMA AAFALVFLDA MKELTATLLL SPTGMTTLAT
EVWAHTANVE FAAAAPYAAL LIVVSGLPVY LLTTRMYLNK A
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