More than 300 homologs were found in PanDaTox collection
for query gene Franean1_5339 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_5339  binding-protein-dependent transport systems inner membrane component  100 
 
 
509 aa  960    Frankia sp. EAN1pec  Bacteria  normal  0.992663  normal  0.953855 
 
 
-
 
NC_007777  Francci3_1591  binding-protein-dependent transport systems inner membrane component  85.74 
 
 
518 aa  745    Frankia sp. CcI3  Bacteria  normal  0.543872  normal  0.457937 
 
 
-
 
NC_008699  Noca_2021  binding-protein-dependent transport systems inner membrane component  58.27 
 
 
522 aa  480  1e-134  Nocardioides sp. JS614  Bacteria  normal  0.0398286  n/a   
 
 
-
 
NC_013757  Gobs_3649  binding-protein-dependent transport systems inner membrane component  61.38 
 
 
500 aa  478  1e-133  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.974086  n/a   
 
 
-
 
NC_008541  Arth_0606  binding-protein-dependent transport systems inner membrane component  52.96 
 
 
536 aa  470  1.0000000000000001e-131  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2520  binding-protein-dependent transport systems inner membrane component  55.05 
 
 
530 aa  445  1e-123  Dickeya zeae Ech1591  Bacteria  normal  0.034918  n/a   
 
 
-
 
NC_007492  Pfl01_2838  binding-protein dependent transport system inner membrane protein  54.01 
 
 
531 aa  431  1e-119  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0735  binding-protein-dependent transport systems inner membrane component  52.96 
 
 
530 aa  427  1e-118  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012880  Dd703_2429  binding-protein-dependent transport systems inner membrane component  54.37 
 
 
527 aa  419  1e-116  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3782  binding-protein-dependent transport systems inner membrane component  48.82 
 
 
526 aa  416  9.999999999999999e-116  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.865045 
 
 
-
 
NC_009077  Mjls_1961  binding-protein-dependent transport systems inner membrane component  50.79 
 
 
526 aa  404  1e-111  Mycobacterium sp. JLS  Bacteria  normal  0.80009  normal 
 
 
-
 
NC_012850  Rleg_4111  binding-protein-dependent transport systems inner membrane component  48.43 
 
 
526 aa  402  1e-111  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.43356  normal 
 
 
-
 
NC_008146  Mmcs_1981  binding-protein-dependent transport systems inner membrane component  50.1 
 
 
526 aa  403  1e-111  Mycobacterium sp. MCS  Bacteria  normal  0.0924311  n/a   
 
 
-
 
NC_008705  Mkms_2027  binding-protein-dependent transport systems inner membrane component  50.1 
 
 
526 aa  403  1e-111  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2857  binding-protein-dependent transport systems inner membrane component  51.63 
 
 
536 aa  401  9.999999999999999e-111  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.145655  normal 
 
 
-
 
NC_010465  YPK_1462  binding-protein-dependent transport systems inner membrane component  51.88 
 
 
528 aa  400  9.999999999999999e-111  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2711  iron(III)-transport system permease  51.88 
 
 
528 aa  399  9.999999999999999e-111  Yersinia pestis Angola  Bacteria  normal  0.0924971  normal  0.0430816 
 
 
-
 
NC_009708  YpsIP31758_1349  iron(III) ABC transporter, permease protein  51.88 
 
 
528 aa  400  9.999999999999999e-111  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4827  binding-protein-dependent transport systems inner membrane component  51.64 
 
 
534 aa  397  1e-109  Burkholderia phytofirmans PsJN  Bacteria  normal  0.232577  normal  0.0312056 
 
 
-
 
NC_007952  Bxe_B1836  ABC Fe+3 transporter, inner membrane subunit  51.86 
 
 
534 aa  394  1e-108  Burkholderia xenovorans LB400  Bacteria  normal  0.374127  normal  0.533271 
 
 
-
 
NC_009832  Spro_2535  binding-protein-dependent transport systems inner membrane component  52.08 
 
 
527 aa  392  1e-107  Serratia proteamaculans 568  Bacteria  normal  0.604854  normal 
 
 
-
 
NC_011988  Avi_6135  ABC transporter membrane spanning protein  48.58 
 
 
513 aa  391  1e-107  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1358  binding-protein-dependent transport systems inner membrane component  49.19 
 
 
525 aa  390  1e-107  Pectobacterium wasabiae WPP163  Bacteria  normal  0.41308  n/a   
 
 
-
 
NC_008703  Mkms_5749  binding-protein-dependent transport systems inner membrane component  50.31 
 
 
533 aa  388  1e-106  Mycobacterium sp. KMS  Bacteria  normal  normal  0.97601 
 
 
-
 
NC_012917  PC1_2920  binding-protein-dependent transport systems inner membrane component  49.69 
 
 
525 aa  384  1e-105  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.905105  n/a   
 
 
-
 
NC_010322  PputGB1_4938  binding-protein-dependent transport systems inner membrane component  47.31 
 
 
521 aa  382  1e-104  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000107301 
 
 
-
 
NC_008463  PA14_62010  putative iron ABC transporter, permease protein  49.9 
 
 
512 aa  381  1e-104  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0428593 
 
 
-
 
NC_002947  PP_4882  binding-protein-dependent transport systems inner membrane component  48.33 
 
 
521 aa  377  1e-103  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4762  binding-protein-dependent transport systems inner membrane component  46.91 
 
 
521 aa  377  1e-103  Pseudomonas putida F1  Bacteria  normal  0.109676  normal  0.504386 
 
 
-
 
NC_010501  PputW619_4672  binding-protein-dependent transport systems inner membrane component  47.5 
 
 
521 aa  375  1e-103  Pseudomonas putida W619  Bacteria  normal  normal  0.548778 
 
 
-
 
NC_013131  Caci_7420  binding-protein-dependent transport systems inner membrane component  50.51 
 
 
503 aa  367  1e-100  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.0090372  normal 
 
 
-
 
NC_007492  Pfl01_0530  binding-protein dependent transport system inner membrane protein  49.46 
 
 
521 aa  357  1.9999999999999998e-97  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.162719 
 
 
-
 
NC_007510  Bcep18194_A3949  ABC Fe3+ transporter, inner membrane subunit  49.29 
 
 
532 aa  345  1e-93  Burkholderia sp. 383  Bacteria  normal  0.305187  normal  0.0483056 
 
 
-
 
NC_013595  Sros_8129  iron ABC transporter, permease protein  48.03 
 
 
502 aa  304  2.0000000000000002e-81  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.161316 
 
 
-
 
NC_009972  Haur_1721  binding-protein-dependent transport systems inner membrane component  42.22 
 
 
530 aa  303  5.000000000000001e-81  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.353247  n/a   
 
 
-
 
NC_008148  Rxyl_1174  binding-protein-dependent transport systems inner membrane component  44.64 
 
 
528 aa  288  2e-76  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2271  binding-protein-dependent transport systems inner membrane component  43.51 
 
 
523 aa  288  2e-76  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.0000425777 
 
 
-
 
NC_009953  Sare_1430  binding-protein-dependent transport systems inner membrane component  45.91 
 
 
511 aa  279  9e-74  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000545483 
 
 
-
 
NC_013235  Namu_1665  binding-protein-dependent transport systems inner membrane component  43.25 
 
 
515 aa  275  1.0000000000000001e-72  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000100634  normal  0.0519495 
 
 
-
 
NC_011831  Cagg_2417  binding-protein-dependent transport systems inner membrane component  37.94 
 
 
536 aa  275  2.0000000000000002e-72  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0253396  normal  0.609444 
 
 
-
 
NC_010718  Nther_2889  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
543 aa  271  2e-71  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_06270  ABC-type Fe3+ transport system, permease component  43.38 
 
 
515 aa  269  1e-70  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0952696  n/a   
 
 
-
 
NC_009338  Mflv_3362  binding-protein-dependent transport systems inner membrane component  40.44 
 
 
511 aa  250  4e-65  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.269197  normal  0.697364 
 
 
-
 
NC_008726  Mvan_3092  binding-protein-dependent transport systems inner membrane component  41.7 
 
 
514 aa  249  8e-65  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.923953  normal  0.633646 
 
 
-
 
NC_014212  Mesil_2723  binding-protein-dependent transport systems inner membrane component  39.96 
 
 
530 aa  228  3e-58  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.5168 
 
 
-
 
NC_013202  Hmuk_2276  binding-protein-dependent transport systems inner membrane component  37.01 
 
 
541 aa  227  4e-58  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_013922  Nmag_1924  binding-protein-dependent transport systems inner membrane component  35.23 
 
 
540 aa  220  6e-56  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2293  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
557 aa  206  1e-51  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6602  binding-protein-dependent transport systems inner membrane component  38.64 
 
 
530 aa  204  2e-51  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.442605 
 
 
-
 
NC_012029  Hlac_0167  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
536 aa  201  1.9999999999999998e-50  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.556719  normal 
 
 
-
 
NC_013922  Nmag_1463  ABC transporter related protein  38.41 
 
 
1057 aa  200  3.9999999999999996e-50  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009767  Rcas_3172  binding-protein-dependent transport systems inner membrane component  34.92 
 
 
540 aa  198  2.0000000000000003e-49  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2071  binding-protein-dependent transport systems inner membrane component  39.14 
 
 
506 aa  191  2e-47  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_1875  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
545 aa  172  1e-41  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0731  binding-protein dependent transport system inner membrane protein  29.22 
 
 
567 aa  166  1.0000000000000001e-39  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0677887  n/a   
 
 
-
 
NC_013173  Dbac_0741  binding-protein-dependent transport systems inner membrane component  29.98 
 
 
550 aa  164  5.0000000000000005e-39  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0894  ABC-type transport system, permease component  32.98 
 
 
553 aa  163  8.000000000000001e-39  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000205423  n/a   
 
 
-
 
NC_008340  Mlg_2575  binding-protein-dependent transport systems inner membrane component  30.84 
 
 
568 aa  162  2e-38  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0287363 
 
 
-
 
NC_011138  MADE_00163  putative ABC-type transport system, permease component  35.28 
 
 
507 aa  159  1e-37  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.452019  n/a   
 
 
-
 
NC_008789  Hhal_1189  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
549 aa  149  1.0000000000000001e-34  Halorhodospira halophila SL1  Bacteria  normal  0.217598  n/a   
 
 
-
 
NC_007643  Rru_A0768  binding-protein dependent transport system inner membrane protein  31.71 
 
 
558 aa  146  7.0000000000000006e-34  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1588  binding-protein-dependent transport systems inner membrane component  26.9 
 
 
563 aa  146  8.000000000000001e-34  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_1198  binding-protein dependent transport system inner membrane protein  31.77 
 
 
545 aa  146  1e-33  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_1727  binding-protein-dependent transport systems inner membrane component  27.65 
 
 
561 aa  145  1e-33  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.368895 
 
 
-
 
NC_007204  Psyc_1546  ABC iron transporter, inner membrane subunit  28.08 
 
 
564 aa  145  2e-33  Psychrobacter arcticus 273-4  Bacteria  normal  0.424688  normal  0.358419 
 
 
-
 
NC_012560  Avin_47290  iron ABC transporter, permease protein  32.14 
 
 
538 aa  144  3e-33  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1091  binding-protein-dependent transport systems inner membrane component  27.82 
 
 
562 aa  144  5e-33  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00794358  n/a   
 
 
-
 
NC_013456  VEA_002575  ferric iron ABC transporter permease protein  26.06 
 
 
541 aa  143  8e-33  Vibrio sp. Ex25  Bacteria  normal  0.500484  n/a   
 
 
-
 
NC_007510  Bcep18194_A4317  ABC spermidine/putrescine transporter, inner membrane subunit  32.65 
 
 
562 aa  142  9.999999999999999e-33  Burkholderia sp. 383  Bacteria  normal  0.946485  normal  0.426161 
 
 
-
 
NC_009012  Cthe_1586  binding-protein-dependent transport systems inner membrane component  22.94 
 
 
551 aa  142  1.9999999999999998e-32  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5429  binding-protein dependent transport system inner membrane protein  30.26 
 
 
555 aa  141  3e-32  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0325707 
 
 
-
 
NC_011901  Tgr7_0454  binding-protein-dependent transport systems inner membrane component  29.46 
 
 
562 aa  140  7e-32  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009654  Mmwyl1_3753  binding-protein-dependent transport systems inner membrane component  27.43 
 
 
554 aa  139  8.999999999999999e-32  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.104442 
 
 
-
 
NC_011729  PCC7424_3626  binding-protein-dependent transport systems inner membrane component  27.39 
 
 
562 aa  139  1e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008228  Patl_1597  binding-protein-dependent transport systems inner membrane component  27.34 
 
 
528 aa  139  1e-31  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1481  binding-protein-dependent transport systems inner membrane component  31.68 
 
 
557 aa  138  2e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.673481  normal 
 
 
-
 
NC_008687  Pden_4446  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
550 aa  138  2e-31  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0997  binding-protein-dependent transport systems inner membrane component  26.75 
 
 
543 aa  137  4e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.000511547 
 
 
-
 
NC_009439  Pmen_0330  binding-protein-dependent transport systems inner membrane component  29.87 
 
 
538 aa  137  5e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1182  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
565 aa  137  7.000000000000001e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.086066  normal  0.404722 
 
 
-
 
NC_009720  Xaut_3763  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
582 aa  135  9.999999999999999e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0177  binding-protein-dependent transport systems inner membrane component  30.91 
 
 
553 aa  135  1.9999999999999998e-30  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.445803 
 
 
-
 
NC_012560  Avin_21310  ABC transporter, permease component  31.79 
 
 
575 aa  135  1.9999999999999998e-30  Azotobacter vinelandii DJ  Bacteria  normal  0.0856621  n/a   
 
 
-
 
NC_011884  Cyan7425_3509  binding-protein-dependent transport systems inner membrane component  28.89 
 
 
574 aa  135  1.9999999999999998e-30  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.00284173  normal  0.308977 
 
 
-
 
NC_009783  VIBHAR_03434  hypothetical protein  25.61 
 
 
541 aa  134  3e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007963  Csal_0551  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
567 aa  134  3e-30  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0441  putative iron ABC transporter, permease protein  23.99 
 
 
533 aa  134  3e-30  Clostridium perfringens ATCC 13124  Bacteria  normal  0.388151  n/a   
 
 
-
 
NC_008060  Bcen_0729  binding-protein-dependent transport systems inner membrane component  32 
 
 
562 aa  134  3.9999999999999996e-30  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1209  binding-protein-dependent transport systems inner membrane component  32 
 
 
562 aa  134  3.9999999999999996e-30  Burkholderia cenocepacia HI2424  Bacteria  normal  0.193935  n/a   
 
 
-
 
NC_002947  PP_5195  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
540 aa  134  6e-30  Pseudomonas putida KT2440  Bacteria  normal  0.154251  normal 
 
 
-
 
NC_004578  PSPTO_0315  iron ABC transporter, permease protein  31.12 
 
 
538 aa  133  6e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0946  binding-protein-dependent transport systems inner membrane component  26.94 
 
 
543 aa  133  9e-30  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_5102  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
540 aa  132  1.0000000000000001e-29  Pseudomonas putida F1  Bacteria  normal  0.497984  normal 
 
 
-
 
NC_008390  Bamb_1092  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
558 aa  132  1.0000000000000001e-29  Burkholderia ambifaria AMMD  Bacteria  normal  0.867638  n/a   
 
 
-
 
NC_008312  Tery_3223  binding-protein-dependent transport systems inner membrane component  26.67 
 
 
555 aa  132  2.0000000000000002e-29  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1530  binding-protein-dependent transport systems inner membrane component  24.22 
 
 
550 aa  131  3e-29  Desulfotomaculum reducens MI-1  Bacteria  normal  0.714891  n/a   
 
 
-
 
NC_010551  BamMC406_1092  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
558 aa  131  3e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2589  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
546 aa  131  3e-29  Thauera sp. MZ1T  Bacteria  normal  0.677105  n/a   
 
 
-
 
NC_010322  PputGB1_5255  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
540 aa  130  5.0000000000000004e-29  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_3963  binding-protein-dependent transport systems inner membrane component  27.45 
 
 
616 aa  130  6e-29  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.0013556  normal 
 
 
-
 
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