| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2023 |
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| Symbol | |
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| ID | 5713018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2142820 |
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| End bp | 2144499 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267947 |
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| Product | putative ABC transporter permease component |
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| Protein accession | YP_001533363 |
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| Protein GI | 159044569 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.967123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0816083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCC TGTCCGATCC CTCTGGCGAG CGTCCCGTGA AAAGCCGTGC CCGCAAGCGC
CGCGAGGCCC GGCTGCTGGG CACGGGCGCG CTCGTGCTCG CGGCGCTCTG CCTGCTGCCC
ATGCTCGCGG TCCTGATCAC GGCGCTGTCG GGGGGGACCG ATACCCTGGC CCAACTCGCC
GACACCGTGC TGCCCGGCTA TACCGGCGCA ACCCTGGCGC TGGTGGTGCT CGTCGGCACC
GGCACCTTCA TGATCGGGAC CTCCACAGCC TGGCTCATAT CGATGTACGA GTTCCCTGGT
CGCCGCTGGC TGGAGGTGCT GCTGGTCCTG CCGCTGGCCT TTCCGGCCTA TGTGCTGGCC
TATGCCTATA CCCATGTGCT CGACCATCCC GGCATCGTTC AGGCGACGCT GCGATCGGTG
ATGGGCTGGG GACCGCGCGA CTACTGGTTT CCCGAGATCC GCTCGCTGGG CGGGGCTGCG
GCCATGCTGA TCCTCGTGCT CTACCCGTAT GTCTATCTGC TCGCCCGCGC GGCTTTCGTG
CAGCAGAGCG CCACCACTTT CTTTGCCGCC CGCGCCCTGG GCCGCACGCC TTTCCGCGCC
TTCCTGGAGG TCTCCATGCC CATGGCGCGC CCTGCCATCG CCGCGGGCGT CCTGCTGGCC
ACCATGGAGA CCATCGCCGA TTTCGGCACC GTGTCCTATT TCGGCGTCCA TACCTTCGCC
ACGGGCATCT ATACCAGCTG GTTCAACATG GGGGACCGGG TGGCCGCGTC CCAGCTTGCC
CTCGGGCTTC TGGGCTTCGC GCTCCTGCTC GCGGTGCTGG AGCGTCAAAG CCGCGGTTCT
GCCAAGTACC ACGGCGGCAA GCGGCAGGAG GCCATGCCCC GCACCACCCT GACCGGCTGG
CACCGCTGGA GCGCGACGAT CCTGTGCGGC GCGCCGGTGC TTCTCGGCGT GGCCATCCCG
ATCGTCACCC TGCTGGTCAT GGGCATCGGG TCCGAGCAGA ACCTGCTCAG CCGCCGCTAC
ATTCGTTTCA TCACGAATTC CCTGACCCTG GCCTCGGCGG CGGCGGTTCT GACGGTCTGC
GCGGCGGTGA TCCTGGGGTA CTACCAACGC GTCCGCCCCG GCCCGCGCTC GGACGCGGCT
CTCTATATCG CGCGGCTCGG CTACGCGATC CCGGGCGGGG TGATCGCGGT AGGGCTTCTG
GTGCCCTTCG CGCTCTTCGA CAACACGCTC GATGCCTGGA TGCGCGCCAA TTTCGACCTC
TCCACGGGGC TGCTGCTGAC CGGATCGATC TGGCTTCTGG TGGGGGCCTA CATGATCCGG
TTTCTCGCCG CGGCGCTGGG CGCCTACGAG GGCGGACAGG CGACGATCAA CCTCAATCTC
GACTATGCCG CGCGGGTGCT GGGCCAGACC GCCTACGGCA CCCTGCGTCG GGTGCACCTG
CCGATCCTGA CGCCAAGCCT GCTGACGGCG CTGCTGATCG TGTTCGTCGA CGTTATGAAG
GAATTGCCCG CGACGCTCAT CATGCGGCCC TTCAACTACG ACACGCTGGC GGTGCAGGCC
TACCGGCTGG CCTCAGACGA ACGGCTCGAA GGGGCGGCCG TGCCCAGCCT GCTGATCGTG
GCCGTGGGGC TCTTGCCGGT TATCCTGCTC TGCCGCCAGG TCCGCCGCCA ATCGCGCTGA
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| Protein sequence | MATLSDPSGE RPVKSRARKR REARLLGTGA LVLAALCLLP MLAVLITALS GGTDTLAQLA
DTVLPGYTGA TLALVVLVGT GTFMIGTSTA WLISMYEFPG RRWLEVLLVL PLAFPAYVLA
YAYTHVLDHP GIVQATLRSV MGWGPRDYWF PEIRSLGGAA AMLILVLYPY VYLLARAAFV
QQSATTFFAA RALGRTPFRA FLEVSMPMAR PAIAAGVLLA TMETIADFGT VSYFGVHTFA
TGIYTSWFNM GDRVAASQLA LGLLGFALLL AVLERQSRGS AKYHGGKRQE AMPRTTLTGW
HRWSATILCG APVLLGVAIP IVTLLVMGIG SEQNLLSRRY IRFITNSLTL ASAAAVLTVC
AAVILGYYQR VRPGPRSDAA LYIARLGYAI PGGVIAVGLL VPFALFDNTL DAWMRANFDL
STGLLLTGSI WLLVGAYMIR FLAAALGAYE GGQATINLNL DYAARVLGQT AYGTLRRVHL
PILTPSLLTA LLIVFVDVMK ELPATLIMRP FNYDTLAVQA YRLASDERLE GAAVPSLLIV
AVGLLPVILL CRQVRRQSR
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