Gene Psyr_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0245 
Symbol 
ID3365721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp257895 
End bp259511 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content64% 
IMG OID637650588 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_233356 
Protein GI66043515 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCATC CTGCCCAACG CCGCTGGTAC CCCCTGGTTT TCGCCATCGC TGCACTGGTC 
GTGCTGCCGC TGAGCGTTCT GCTGCTGTCG TGGGAGACGG TCGACCAGCA GATATGGTCG
CACCTGCTCG AAACCCAGAT GGCGCGTCTG CTGAGCAATA CGCTGATCCT GGTGCTGGGT
GTCGGCGTGG GCGTGACCCT GCTGGGGGTG AGCCTTGCGT GGCTGACCAG CCTGTGTGAA
TTCCCTGGCC GCCGCTGGCT GGACTGGGCG CTGATGCTGC CGTTCGCGAT CCCCGCCTAT
GTGCTGGCGT TCGTGTTCGT CGGGCTGCTG GATTTTTCCG GCCCGGTGCA GACCCTGATG
CGCGAATGGT TCGGCTCCGG TCTGCGCCTG CCCCGGGTGC GTTCTACCGG TGGGGTGATC
ATCGTCCTGG TGCTGGTTTT CTATCCCTAC GTCTACCTGT TGGCGCGCAC GGCGTTTCTG
GCGCAGGGCA AGGGTCTGAT GGAAGCTGCG CGAGTGCTGG GCAATACGCC CCTGCAGGCT
TTCTGGCGCG TGGCGCTGCC AATGGCGCGT CCGGCCATCG GCGCGGGGGT GGCGCTGGCG
CTGATGGAAA CCCTGGCCGA TTTTGGTGCG GTGTCGGTGT TCAACTTCGA CACGTTCACC
ACTGCCATCT ACAAGACCTG GTACGGCTTC TTCAGCCTGT CCAGCGCCGC GCAACTGGCC
AGCCTGTTGC TGTTGGCCGT GCTGGTGCTG CTGTACGGCG AACGCCGCGC CCGGAGGGCA
AGCCGACCGG CCAACGAGCG TCCGCGTGGC GCTGCGCTTT ACCGGTTAAG CGGCATCAAG
GCATGGGCCG CGAGCTTCTG GTGTGGGCTG GTGTTTCTCT GTGCCTTCGT GGTGCCGATG
CTGCAATTGA TCGTCTGGGT CTGGCAGCGT GGTCGCTTCG ATCTGGATGA GCGCTACACC
GGTCTGATTC TGCACACGCT CTATCTGGGT GGCATGGCGG CGTTGATCAC TGTCAGCGTG
GCGCTGATTC TGGCGTTTGC CCGACGTATG GCGCCCACGC CTGCGATCCG CTCCGGCGTC
AGCCTCGCCA ACCTCGGCTA CGCATTGCCA GGCTCGGTAC TGGCCGTTTC AATCATGCTG
GCGTTCAGTT ACCTGGACCG CGAACTGGTC ATTCCGCTGT CCGGCTGGCT GGGCGGCGCA
GGCAAGCCTT TGCTGCTGGG CAGCCTCTCG GCCTTGCTGC TGGCGTATCT GGTGCGTTTC
ATCGCCGTCG CCTTCGGTCC GCTGGAGCAC AGCCTGTCGC GCATCCGCCC GTCATTGCCT
GAAGCGGCGC GCAGTCTGGG GGTCAGCGGG CCAAAGTTGT TTCTCAACGT GTATCTGCCG
TTGCTGGTGC CAGGGGCGCT GAGCGCGGCG CTGCTGGTGT TCGTCGATGT GCTCAAGGAA
ATGCCGGCAA CCCTGCTTAT GCGCCCGTTT GGCTGGGATA CGCTGGCGGT TCGCATCTTC
GAAATGACCA GCGAGGGCGA GTGGGCGCGG GCTGCGTTGC CAGCTTTGTC GCTGGTGCTT
GTAGGATTAT TACCCGTCAT TGGGCTGATT CGTCGCTCTG CCCGGCAGAT TGGCTAG
 
Protein sequence
MAHPAQRRWY PLVFAIAALV VLPLSVLLLS WETVDQQIWS HLLETQMARL LSNTLILVLG 
VGVGVTLLGV SLAWLTSLCE FPGRRWLDWA LMLPFAIPAY VLAFVFVGLL DFSGPVQTLM
REWFGSGLRL PRVRSTGGVI IVLVLVFYPY VYLLARTAFL AQGKGLMEAA RVLGNTPLQA
FWRVALPMAR PAIGAGVALA LMETLADFGA VSVFNFDTFT TAIYKTWYGF FSLSSAAQLA
SLLLLAVLVL LYGERRARRA SRPANERPRG AALYRLSGIK AWAASFWCGL VFLCAFVVPM
LQLIVWVWQR GRFDLDERYT GLILHTLYLG GMAALITVSV ALILAFARRM APTPAIRSGV
SLANLGYALP GSVLAVSIML AFSYLDRELV IPLSGWLGGA GKPLLLGSLS ALLLAYLVRF
IAVAFGPLEH SLSRIRPSLP EAARSLGVSG PKLFLNVYLP LLVPGALSAA LLVFVDVLKE
MPATLLMRPF GWDTLAVRIF EMTSEGEWAR AALPALSLVL VGLLPVIGLI RRSARQIG