| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0298 |
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| Symbol | |
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| ID | 8806029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 315089 |
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| End bp | 316858 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003459549 |
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| Protein GI | 289207483 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0166577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC AGCCCTCCAA CCCAGCCCTG CCCGCTACGC GAACCATTTC TTGGGGCAGA
CCGCGACTAT CGTTCAGTCT GTGGTCGGTC GTGGCGATCA CGGTGGCGCT GGTGCTCGCG
CTCCCGGTGC TCGTGATCTT CGGGCATGTA TTCATCCCGG CAGGCGAGGT CTGGGAACAC
CTGCGCCAGA CGGTACTGGC CGATTACGTC ACCAACTCCC TGGCGCTGGT GGTCGGCGTC
GGCATTGGGG TGCTGCTGAT CGGGGTTCCG GTCGCCTGGC TGGTCAGCAT GTGCGAGTTT
CCCGGACGCG GGATCTTCCA GTGGGCGCTG ATGCTGCCGC TGGCGATGCC GGCCTACATC
ATTGCCTACA CCTATACCGG CATGCTGGAC TTCTCCGGGC CAGTGCAGAG CCTGATTCGT
GACCTGACCG GGCTGGGCTA CGGGGAGTAC TTCTTTCCCG AGATCCGCTC GCTGGGCGGG
GCGATGGTCA TGCTGATGCT GGTGCTCTAC CCGTATGTGT ACCTGCTCAG CCGCGCGGCG
TTTCTGGAGC AGTCGGTCTG CGTGCTGGAA GTCTCGCGCA CGCTGGGTCA GGGTCCTTTC
GGCGGGTTTC GCCGCGTGGC CCTGCCACTG GCCCGCCCAG CGATCATCGC CGGGCTGACC
CTTGCGCTGA TGGAAGTGCT CGCGGACTAC GGCACGGTCG CCTACTTCGG CATCAGCACC
TTTACCACCG GCGTGTTCCG CACCTGGTAC GGGCTGGGCG ACCCGGCCGC CGCCGCGCAG
CTCTCGGCGG TGCTGCTGAC CTTCGTGTTC ATACTCATCG TGCTGGAGCG CTGGTCGCGC
GCGAAGGCCC GCTTCCATCA CACCAGCCGC CGCTATTCCA CCCTGCCGCG CTATCGCCTG
CAGGGCTGGA AGGCCGCGGC GGCGTTCACC GCCTGCCTGC TGCCGGTGGT ACTCGGCTTC
CTGCTGCCCG CCGCGCAACT TTCGATCTGG GCGGCACAAA CCACCGACCA CTGGATGAAC
GCCCGCTTTG CCGAGCTGGT GTTCAACACC TTCTGGCTGG CGGTCGCCGC GGCCGTGATC
GCCGTGGTTC TGGCCCTGGT ACTGGCCTAT GCCAAGCGCA TGCAGGGCGG CCCGTTCACC
AACCTCGCCG TACGCGTGGC GGGCATGGGC TACGCGATCC CCGGCACGGT GATCGCGATT
GGGGTGATGA TCCCGTTCGC CGCCTTCGAC AACGCCCTGG ACGGCTTCAT GCGCGACACC
TTCGGGCTGT CGACCGGGCT GCTGCTGTCC GGCACCGTGT TCGCCCTGCT GTTCGCCTAC
GCGGTGCGCT TTCTCGCGGT CTCGCTGCAG ACGGTGGAGG CAGGCCTGGG CAAGATCCAG
CCGAGCATGG ACGACGCCGC CCGTTCGCTG GGCATGCGAC CGCTGCAGAC CCTGACCCGC
GTGCACCTGC CGATCATGCG CGGCACGCTA CTGACGGCGC TCTTGCTGGT CTTTGTCGAT
GTGCTCAAGG AGCTGCCCGC GACACTGATT CTGCGCCCGT TCGACTTCAA CACCCTCGCC
GTGCGCGCCT TCGAGCTGGC CGGGGACGAG CGGCTGGCCG AATCCTCCAG TGCCGCACTG
GCCATCGTGC TGGTCGGACT GGTTCCCGTT ATCCTTCTGT CAATGACCAT CGGCCGCTCG
CGGCCTGGTC AGGGTGCACC CAACCAGCGC CCGGACGCCG AGGCCGATGC GCCGCAAAAA
CCGCTTCCCA TGCCTGCCGG TACGACCTGA
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| Protein sequence | MSAQPSNPAL PATRTISWGR PRLSFSLWSV VAITVALVLA LPVLVIFGHV FIPAGEVWEH
LRQTVLADYV TNSLALVVGV GIGVLLIGVP VAWLVSMCEF PGRGIFQWAL MLPLAMPAYI
IAYTYTGMLD FSGPVQSLIR DLTGLGYGEY FFPEIRSLGG AMVMLMLVLY PYVYLLSRAA
FLEQSVCVLE VSRTLGQGPF GGFRRVALPL ARPAIIAGLT LALMEVLADY GTVAYFGIST
FTTGVFRTWY GLGDPAAAAQ LSAVLLTFVF ILIVLERWSR AKARFHHTSR RYSTLPRYRL
QGWKAAAAFT ACLLPVVLGF LLPAAQLSIW AAQTTDHWMN ARFAELVFNT FWLAVAAAVI
AVVLALVLAY AKRMQGGPFT NLAVRVAGMG YAIPGTVIAI GVMIPFAAFD NALDGFMRDT
FGLSTGLLLS GTVFALLFAY AVRFLAVSLQ TVEAGLGKIQ PSMDDAARSL GMRPLQTLTR
VHLPIMRGTL LTALLLVFVD VLKELPATLI LRPFDFNTLA VRAFELAGDE RLAESSSAAL
AIVLVGLVPV ILLSMTIGRS RPGQGAPNQR PDAEADAPQK PLPMPAGTT
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