More than 300 homologs were found in PanDaTox collection
for query gene TK90_0298 on replicon NC_013889
Organism: Thioalkalivibrio sp. K90mix



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011901  Tgr7_0454  binding-protein-dependent transport systems inner membrane component  73.35 
 
 
562 aa  762    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_013889  TK90_0298  binding-protein-dependent transport systems inner membrane component  100 
 
 
589 aa  1161    Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0166577  normal 
 
 
-
 
NC_009654  Mmwyl1_3753  binding-protein-dependent transport systems inner membrane component  60.47 
 
 
554 aa  615  1e-175  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.104442 
 
 
-
 
NC_011729  PCC7424_3626  binding-protein-dependent transport systems inner membrane component  52.6 
 
 
562 aa  589  1e-167  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007963  Csal_0551  binding-protein-dependent transport systems inner membrane component  55.9 
 
 
567 aa  577  1.0000000000000001e-163  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1597  binding-protein-dependent transport systems inner membrane component  53.99 
 
 
528 aa  573  1.0000000000000001e-162  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3509  binding-protein-dependent transport systems inner membrane component  54.45 
 
 
574 aa  563  1.0000000000000001e-159  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.00284173  normal  0.308977 
 
 
-
 
NC_013161  Cyan8802_3435  binding-protein-dependent transport systems inner membrane component  52.77 
 
 
560 aa  553  1e-156  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2669  binding-protein-dependent transport systems inner membrane component  52.77 
 
 
560 aa  553  1e-156  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_3223  binding-protein-dependent transport systems inner membrane component  52.39 
 
 
555 aa  541  9.999999999999999e-153  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1091  binding-protein-dependent transport systems inner membrane component  48.21 
 
 
562 aa  519  1e-146  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00794358  n/a   
 
 
-
 
NC_011662  Tmz1t_2589  binding-protein-dependent transport systems inner membrane component  54.31 
 
 
546 aa  515  1e-144  Thauera sp. MZ1T  Bacteria  normal  0.677105  n/a   
 
 
-
 
NC_007298  Daro_1198  binding-protein dependent transport system inner membrane protein  54.83 
 
 
545 aa  495  1e-139  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0768  binding-protein dependent transport system inner membrane protein  51.17 
 
 
558 aa  498  1e-139  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0122  binding-protein-dependent transport systems inner membrane component  49.44 
 
 
559 aa  498  1e-139  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1407  iron(III) ABC transporter permease protein  50.94 
 
 
543 aa  474  1e-132  Synechococcus elongatus PCC 7942  Bacteria  normal  0.960253  normal 
 
 
-
 
NC_007802  Jann_0134  binding-protein-dependent transport systems inner membrane component  50.88 
 
 
558 aa  475  1e-132  Jannaschia sp. CCS1  Bacteria  normal  0.0921183  normal 
 
 
-
 
NC_009952  Dshi_2023  putative ABC transporter permease component  49.33 
 
 
559 aa  465  1e-129  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.967123  normal  0.0816083 
 
 
-
 
NC_009783  VIBHAR_03434  hypothetical protein  42.35 
 
 
541 aa  439  9.999999999999999e-123  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009719  Plav_0177  binding-protein-dependent transport systems inner membrane component  48.1 
 
 
553 aa  437  1e-121  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.445803 
 
 
-
 
NC_013456  VEA_002575  ferric iron ABC transporter permease protein  41.98 
 
 
541 aa  437  1e-121  Vibrio sp. Ex25  Bacteria  normal  0.500484  n/a   
 
 
-
 
NC_010506  Swoo_0997  binding-protein-dependent transport systems inner membrane component  42.8 
 
 
543 aa  436  1e-121  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.000511547 
 
 
-
 
NC_009901  Spea_0845  binding-protein-dependent transport systems inner membrane component  42.8 
 
 
543 aa  434  1e-120  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2575  binding-protein-dependent transport systems inner membrane component  45.41 
 
 
568 aa  429  1e-119  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0287363 
 
 
-
 
NC_009457  VC0395_A0138  iron(III) ABC transporter, permease protein  44.01 
 
 
541 aa  428  1e-118  Vibrio cholerae O395  Bacteria  hitchhiker  0.000000182315  n/a   
 
 
-
 
NC_009438  Sputcn32_3226  binding-protein-dependent transport systems inner membrane component  42.96 
 
 
544 aa  423  1e-117  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2587  iron(III) ABC transporter, permease protein  42.83 
 
 
543 aa  424  1e-117  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0607  binding-protein-dependent transport systems inner membrane component  42.43 
 
 
544 aa  420  1e-116  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0946  binding-protein-dependent transport systems inner membrane component  41.95 
 
 
543 aa  422  1e-116  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0731  binding-protein dependent transport system inner membrane protein  41.25 
 
 
567 aa  417  9.999999999999999e-116  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0677887  n/a   
 
 
-
 
NC_008321  Shewmr4_3346  binding-protein-dependent transport systems inner membrane component  42.43 
 
 
544 aa  417  9.999999999999999e-116  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1797  binding-protein-dependent transport systems inner membrane component  45.76 
 
 
557 aa  419  9.999999999999999e-116  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.406299 
 
 
-
 
NC_008577  Shewana3_3516  binding-protein-dependent transport systems inner membrane component  42.06 
 
 
544 aa  417  9.999999999999999e-116  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0163  putative iron(III) ABC transporter, fused inner membrane subunits  45.87 
 
 
557 aa  414  1e-114  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1481  binding-protein-dependent transport systems inner membrane component  45.83 
 
 
557 aa  414  1e-114  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.673481  normal 
 
 
-
 
NC_004347  SO_0743  iron(III) ABC transporter, permease protein  43.79 
 
 
544 aa  410  1e-113  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0602  binding-protein-dependent transport systems inner membrane component  43.45 
 
 
543 aa  409  1e-113  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3816  binding-protein-dependent transport systems inner membrane component  43.45 
 
 
543 aa  412  1e-113  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0317  binding-protein-dependent transport systems inner membrane component  44.97 
 
 
570 aa  407  1.0000000000000001e-112  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.931275 
 
 
-
 
NC_009092  Shew_0862  binding-protein-dependent transport systems inner membrane component  43.93 
 
 
543 aa  404  1e-111  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3692  binding-protein-dependent transport systems inner membrane component  43.63 
 
 
543 aa  404  1e-111  Shewanella baltica OS185  Bacteria  normal  0.25371  n/a   
 
 
-
 
NC_011663  Sbal223_3634  binding-protein-dependent transport systems inner membrane component  43.07 
 
 
543 aa  398  1e-109  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0330  binding-protein-dependent transport systems inner membrane component  44.61 
 
 
538 aa  396  1e-109  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0637  binding-protein-dependent transport systems inner membrane component  44.77 
 
 
543 aa  395  1e-108  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.744333  n/a   
 
 
-
 
NC_008789  Hhal_1189  binding-protein-dependent transport systems inner membrane component  44.01 
 
 
549 aa  393  1e-108  Halorhodospira halophila SL1  Bacteria  normal  0.217598  n/a   
 
 
-
 
NC_012560  Avin_47290  iron ABC transporter, permease protein  46.48 
 
 
538 aa  390  1e-107  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3006  iron(III) ABC transporter, inner membrane binding component  41.82 
 
 
543 aa  391  1e-107  Psychromonas ingrahamii 37  Bacteria  normal  0.525048  normal  0.629796 
 
 
-
 
NC_007498  Pcar_0894  ABC-type transport system, permease component  43.67 
 
 
553 aa  386  1e-106  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000205423  n/a   
 
 
-
 
NC_008309  HS_0782  iron-uptake permease inner membrane protein  39.27 
 
 
555 aa  389  1e-106  Haemophilus somnus 129PT  Bacteria  normal  0.297135  n/a   
 
 
-
 
NC_009720  Xaut_3763  binding-protein-dependent transport systems inner membrane component  44.86 
 
 
582 aa  386  1e-106  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0667  iron(III) ABC transporter, permease protein  44.77 
 
 
542 aa  388  1e-106  Shewanella amazonensis SB2B  Bacteria  normal  0.0603449  normal 
 
 
-
 
NC_013173  Dbac_0741  binding-protein-dependent transport systems inner membrane component  41.63 
 
 
550 aa  384  1e-105  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5429  binding-protein dependent transport system inner membrane protein  46.57 
 
 
555 aa  383  1e-105  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0325707 
 
 
-
 
NC_007005  Psyr_0245  binding-protein dependent transport system inner membrane protein  46.77 
 
 
538 aa  375  1e-103  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0441  putative iron ABC transporter, permease protein  35.83 
 
 
533 aa  376  1e-103  Clostridium perfringens ATCC 13124  Bacteria  normal  0.388151  n/a   
 
 
-
 
NC_004311  BRA0699  iron compound ABC transporter, permease protein, putative  41.18 
 
 
589 aa  374  1e-102  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0315  iron ABC transporter, permease protein  46.18 
 
 
538 aa  374  1e-102  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0654  putative iron compound ABC transporter, permease protein  41.18 
 
 
589 aa  374  1e-102  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0169  binding-protein-dependent transport systems inner membrane component  40.37 
 
 
566 aa  369  1e-101  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3823  binding-protein-dependent transport systems inner membrane component  42.1 
 
 
569 aa  363  4e-99  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1530  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
550 aa  361  2e-98  Desulfotomaculum reducens MI-1  Bacteria  normal  0.714891  n/a   
 
 
-
 
NC_007404  Tbd_0989  iron transport system permease protein  43.92 
 
 
529 aa  361  3e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5255  binding-protein-dependent transport systems inner membrane component  45.97 
 
 
540 aa  357  2.9999999999999997e-97  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A4317  ABC spermidine/putrescine transporter, inner membrane subunit  45.97 
 
 
562 aa  357  3.9999999999999996e-97  Burkholderia sp. 383  Bacteria  normal  0.946485  normal  0.426161 
 
 
-
 
NC_008060  Bcen_0729  binding-protein-dependent transport systems inner membrane component  46.95 
 
 
562 aa  355  2e-96  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1209  binding-protein-dependent transport systems inner membrane component  46.95 
 
 
562 aa  355  2e-96  Burkholderia cenocepacia HI2424  Bacteria  normal  0.193935  n/a   
 
 
-
 
NC_009512  Pput_5102  binding-protein-dependent transport systems inner membrane component  45.58 
 
 
540 aa  354  2.9999999999999997e-96  Pseudomonas putida F1  Bacteria  normal  0.497984  normal 
 
 
-
 
NC_010551  BamMC406_1092  binding-protein-dependent transport systems inner membrane component  47.15 
 
 
558 aa  353  2.9999999999999997e-96  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5195  binding-protein-dependent transport systems inner membrane component  45.78 
 
 
540 aa  353  5e-96  Pseudomonas putida KT2440  Bacteria  normal  0.154251  normal 
 
 
-
 
NC_010508  Bcenmc03_1182  binding-protein-dependent transport systems inner membrane component  46.76 
 
 
565 aa  352  1e-95  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.086066  normal  0.404722 
 
 
-
 
NC_008687  Pden_4446  binding-protein-dependent transport systems inner membrane component  43.59 
 
 
550 aa  350  4e-95  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_1092  binding-protein-dependent transport systems inner membrane component  47.15 
 
 
558 aa  350  5e-95  Burkholderia ambifaria AMMD  Bacteria  normal  0.867638  n/a   
 
 
-
 
NC_010501  PputW619_5020  binding-protein-dependent transport systems inner membrane component  45.58 
 
 
556 aa  344  2.9999999999999997e-93  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5961  binding-protein-dependent transport systems inner membrane component  46.15 
 
 
542 aa  342  8e-93  Pseudomonas aeruginosa PA7  Bacteria  normal  0.727923  n/a   
 
 
-
 
NC_007969  Pcryo_1727  binding-protein-dependent transport systems inner membrane component  38.34 
 
 
561 aa  342  9e-93  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.368895 
 
 
-
 
NC_007204  Psyc_1546  ABC iron transporter, inner membrane subunit  38.12 
 
 
564 aa  342  1e-92  Psychrobacter arcticus 273-4  Bacteria  normal  0.424688  normal  0.358419 
 
 
-
 
NC_008463  PA14_68890  putative iron ABC transporter, permease protein  45.95 
 
 
539 aa  342  2e-92  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2094  binding-protein-dependent transport systems inner membrane component  45.36 
 
 
562 aa  340  4e-92  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007799  ECH_0972  ABC transporter, permease protein  38.61 
 
 
521 aa  336  5.999999999999999e-91  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  0.200041  n/a   
 
 
-
 
NC_011992  Dtpsy_2888  binding-protein-dependent transport systems inner membrane component  43.93 
 
 
544 aa  332  1e-89  Acidovorax ebreus TPSY  Bacteria  normal  0.553372  n/a   
 
 
-
 
NC_008782  Ajs_3565  binding-protein-dependent transport systems inner membrane component  44.34 
 
 
552 aa  330  3e-89  Acidovorax sp. JS42  Bacteria  normal  0.778216  normal  0.173328 
 
 
-
 
NC_008781  Pnap_0851  binding-protein-dependent transport systems inner membrane component  42.77 
 
 
540 aa  329  9e-89  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1013  iron(III) ABC transporter, permease protein  39.74 
 
 
542 aa  328  2.0000000000000001e-88  Colwellia psychrerythraea 34H  Bacteria  normal  0.0312612  n/a   
 
 
-
 
NC_007354  Ecaj_0154  binding-protein dependent transport system inner membrane protein  35.9 
 
 
539 aa  328  2.0000000000000001e-88  Ehrlichia canis str. Jake  Bacteria  normal  0.234714  n/a   
 
 
-
 
NC_009524  PsycPRwf_0870  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
533 aa  328  2.0000000000000001e-88  Psychrobacter sp. PRwf-1  Bacteria  normal  0.0400876  hitchhiker  0.00000113394 
 
 
-
 
NC_012791  Vapar_3700  binding-protein-dependent transport systems inner membrane component  44.36 
 
 
550 aa  322  9.000000000000001e-87  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6289  binding-protein-dependent transport systems inner membrane component  42.35 
 
 
542 aa  322  9.999999999999999e-87  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2103  binding-protein-dependent transport systems inner membrane component  46.11 
 
 
543 aa  322  9.999999999999999e-87  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_1507  binding-protein-dependent transport systems inner membrane component  43.11 
 
 
555 aa  320  3.9999999999999996e-86  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.665104  normal 
 
 
-
 
NC_008825  Mpe_A1086  ABC-type Fe3+ transport system, permease component  45.32 
 
 
537 aa  319  1e-85  Methylibium petroleiphilum PM1  Bacteria  normal  0.0627079  normal  0.556717 
 
 
-
 
NC_013421  Pecwa_2990  binding-protein-dependent transport systems inner membrane component  40.69 
 
 
565 aa  317  5e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1149  binding-protein-dependent transport systems inner membrane component  43.51 
 
 
536 aa  315  9.999999999999999e-85  Polaromonas sp. JS666  Bacteria  normal  0.945562  normal 
 
 
-
 
NC_011894  Mnod_6368  binding-protein-dependent transport systems inner membrane component  44.55 
 
 
553 aa  315  1.9999999999999998e-84  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.725072  n/a   
 
 
-
 
NC_010002  Daci_1589  binding-protein-dependent transport systems inner membrane component  42.39 
 
 
548 aa  314  2.9999999999999996e-84  Delftia acidovorans SPH-1  Bacteria  normal  0.61199  normal 
 
 
-
 
NC_002978  WD1136  iron compound ABC transporter, permease protein, putative  36.47 
 
 
532 aa  311  2e-83  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0571  binding-protein-dependent transport systems inner membrane component  41.11 
 
 
550 aa  310  4e-83  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1594  binding-protein-dependent transport systems inner membrane component  42.56 
 
 
541 aa  310  4e-83  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0580  binding-protein-dependent transport systems inner membrane component  40.92 
 
 
550 aa  310  5e-83  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008599  CFF8240_0116  iron ABC transporter, permease protein  33.52 
 
 
518 aa  307  4.0000000000000004e-82  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0914  binding-protein-dependent transport systems inner membrane component  43.53 
 
 
558 aa  306  5.0000000000000004e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.363007 
 
 
-
 
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