| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2103 |
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| Symbol | |
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| ID | 6161423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2299239 |
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| End bp | 2300870 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664872 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001791135 |
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| Protein GI | 171058786 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTG TGCCCGCCAC GCGGCTGAAC CACGCGCTCG GTCTGCTCTG CCTGTTGCTG
GCGTTGCCGG TGCTGAGCCT GGCGTCGGCC TGGTTCAGCC TCGACGCGGA TGCGCTCGAT
CTGCTTCGGC ACCAGTTCTC GACCGTGTTG CCCGCTTACG CCAGCAGCTC GCTGCAACTG
GCGGTGGCCG TCGGCCTGGG CGTGGCGCTG GTCGGCGCCG GCACGGCGGC GGCGGTCACG
CTGTTCGATT TCCCGGGCCG GCGCGCCCTC GAGCTGGCGC TGCTGCTGCC GCTGGCGATG
CCGGCCTACG TGCTGGCCTA CGTCTACACC GACACCCTGC AATCGAGCGG ACCGCTGCAA
GCCTGGCTGC GCATGCGCAC CGGCGCCACC GGCGCGCTCT GGCCTGACGT GCGCAACCTG
GCGGGCGCGG TGGTGCTGTT CGTGCTGGCG CTCTATCCCT ACGTCTACCT GCTGACCCGC
ACCGCGCTGG CCGGACGCGG CTCGGCGCTG CTCGAAGCCG CCCGCCTGCT CGGCGCCGGC
ATGACGCGGC GCGTGCGCGA GGTGGCGCTG CCGCTGGCAC GCCCGGCGAT CGCCGCCGGA
GTCTCGCTGG CGCTGATGGA AACGCTGGCC GACTACGGTG TCGGCGCCTA CTTCGGCCTG
CAGACCTTCA CCACCGGCAT CTACAAGGCC TGGCTGTCGT TCGGCGACCG CATCGCCGCC
GCGCAGCTGG CGACCGTGCT GCTGGTGGTG GTGGCGCTGC TGGTGTGGCT CGAACACCAT
GCGCAAGCCC GGCTGCGATT CGCCTCCAGC CGCCCGGCCG GCCGTGGCGC CGACGCCCAG
CCGCTGCGCC TGAAGGGCCC GGCGGCGCTG ACCGCCATGC TGCTGTGCAG CCTGCCGGTG
CTGCTCGGTT TCGTGCTGCC GGTGCTGCTG CTGCTGCGCC TGGTGCTCGA GGAACACCTG
CACGGCGAGT TCGGCCTGCC GTGGGATCGT TTCCTGACCT GGTCCTGGGC CAGCCTGCGA
CTCGCCGGCG GCGCTGCGCT GCTGGCCGCG CTGTTCGCGC TGGTGCTGGC GTTTGCCGTG
CGGCTGCGGC CGAGCTGGCC GCTGCGGGTG GGCATCCGCG TGGTGTCGCT CGGTTACGCC
GTGCCGGGCG CGGTGATCGC CATCGGCCTG CTGCTGCCGG CCGGCTGGCT GCAGCAGCGC
TGGCCCGACA GCAACTGGGG CACGCTGCTG ACCAGCACCT CGTTCGGCCT GATCTATGCG
TACCTGGTGC GCTTCTCCGC AGTGGCGCTG CAGTCGGTGC AGGCCGGTTA TGCCCGCCTC
TCGCCCAGCC TGGACGAAAG TTCGCGCATG CTCGGCGCCG GCCCGGCGCG CATGTTCTGG
CAGGTGCACG GCCCGCTGCT GCTGCCGTCG GTGCTGGGGG CGGCGCTGCT GGTGTTCGTG
GACGTCATGA AGGAGCTGCC CGCCACGCTG GTGCTGCGCC CCTTCAACAG CGACACCCTG
GCGGTGGTGG CCTACCAGCT GGCCCGCGAC GAGCGACTGG CCGAGGCCGC CCTGCCCTCG
CTGGCGATCG TGCTGGTCGG GCTGATCCCG GTGCTGATGC TGGCGCGGGC GATCCGGCGC
GCCGCCGACT GA
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| Protein sequence | MSTVPATRLN HALGLLCLLL ALPVLSLASA WFSLDADALD LLRHQFSTVL PAYASSSLQL
AVAVGLGVAL VGAGTAAAVT LFDFPGRRAL ELALLLPLAM PAYVLAYVYT DTLQSSGPLQ
AWLRMRTGAT GALWPDVRNL AGAVVLFVLA LYPYVYLLTR TALAGRGSAL LEAARLLGAG
MTRRVREVAL PLARPAIAAG VSLALMETLA DYGVGAYFGL QTFTTGIYKA WLSFGDRIAA
AQLATVLLVV VALLVWLEHH AQARLRFASS RPAGRGADAQ PLRLKGPAAL TAMLLCSLPV
LLGFVLPVLL LLRLVLEEHL HGEFGLPWDR FLTWSWASLR LAGGAALLAA LFALVLAFAV
RLRPSWPLRV GIRVVSLGYA VPGAVIAIGL LLPAGWLQQR WPDSNWGTLL TSTSFGLIYA
YLVRFSAVAL QSVQAGYARL SPSLDESSRM LGAGPARMFW QVHGPLLLPS VLGAALLVFV
DVMKELPATL VLRPFNSDTL AVVAYQLARD ERLAEAALPS LAIVLVGLIP VLMLARAIRR
AAD
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