| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0571 |
|---|
| Symbol | |
|---|
| ID | 5834117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 627628 |
|---|
| End bp | 629280 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641366349 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001638057 |
|---|
| Protein GI | 163850014 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCG CACGTGGCCT CCTCTACGCG GCGGCGGCGC TGCTGGCCGC CGTCCTCCTG
GCGCCGGTCG CCTCGCTCGC GGTCGCGGCG GCCGACGGGT CCGGCGAGTT GTGGCCGCAT
CTTGCGGCCT ATGTGCTGCC GCAGGCGATC CGCGAGACGG GCTTGCTTCT CGCCGGTGTC
GGAATCCTGG TGATCGGGCT CGGCACCGGA ACGGCGTGGC TCGTCTCGGC CTTCGCCTTT
CCTGGCCGTC GGCTGCTCGA CGCGGCCCTG CTGCTGCCGC TCGCGGTGCC GACCTATGTG
GTGGCCTACG CCTATCTCGA TCTGATGCAC CCGCTCGGTC CGGTGCAGAG CGGACTGCGC
GGACTGCTCG GCCTGTCGAG CCCACGCGAC CTGTCTTTTC CCGATCTGCG CTCACTGCCC
GGCTGCATTC TGCTCCTCGG CTTCGTCCTC TACCCCTACG TCTACCTGCC GACGCGGGCG
CTGTTCCTGA TGCGGGCGGG GACGCTGCTG GAGGCCGCGC GGATGCTCGG CGCCGGACCG
GCGCGGACCT TCTTCCGGGT GGCGCTGCCG CTAGCTCGGC CCGCCATCGC CCTCGGCACC
GGTCTCGCAC TGATGGAGGC GCTCAACGAT GTCGGCGCGG CCGAGTTCCT GGGGGTCCGC
ACCCTCACGG TGCAGGTCTA CGCGACCTGG GTGAACCGCT CGGACCTGCC CGGTGCCGCG
CAGATCGCAC TAGTGATGCT GGCCGGCGTC GTCGGTCTCG TCGCGCTCGA GCGGCTCGCT
CGCGGCGGGA GAGGCTATGC CGGTTCGGGC CATCGCGACC GGCCGACCGC GCGTCGGCCG
CTGTCGGGAT GGCGGGCGGG TCTCGCTCTG GGCCTCGGCC TCACTCCCGT GCTGCTCGGC
TTCGGCCTGC CCGCGGGCTA TCTCGCATGG GCCGTCTGGC AGAGACTAAA GGGGATGGGG
CTGCCGGACA CCCTCGCCGC GCAGGCCCTC AACACCGTGC TCTACGCGGG CGCCGCGACC
CTGGTCACGG TCGCGGTGGG GCTGCTGGTG GCTGCCTCCC CGCATCTCCT GGGGCGACGT
AGCGGACTGG CACTGATCCG GGCCGCCGGT CTCGGCTACG CGATGCCGGG CACGGTGCTG
GCCGTGGGGC TCCTCGCCCC GCTCGCGCTG CTTGATACCG GGCTGACCAA TCTGGCCGGC
GCCGGGCTCG GCTGGGCACC CGCCGTCGGC CTCGGCACGG GCGCAGCGCT GGTCATCGCC
TATACGCTCC GCTTCCTGAC CATTCCGGTC GGCGCGACGG AAGCAGGTCT CGCGCGCATC
CCCTCGACCC TTCCCGACGC GGCGCGGATG CTGGGACGCG GGCGCTTCGG CACACTCCTC
GCGGTACAAT TGCCGCTGGC ATGGCCCGCC GTCCTGAGCG GGGCGCTGCT CGCCTTCGTG
GATATGGCGA AGGAACTACC GGTGACGTTG CTTCTGCGTC CGCTCAACGT CGAGACGCTG
AGCACGCACC TCTACGGCGA AGCCGCTCGC GGCACCTACG AGGACGGTGC CGCGAGCGCC
CTGTTGATCG TGATGACGGG TCTGATCCCC GTTGCCTTGC TGCTGCGCCT CAACCGGGGT
GCCGGGCTGC GGCCGAGCCG GTCGGACGCC TGA
|
|---|
| Protein sequence | MTPARGLLYA AAALLAAVLL APVASLAVAA ADGSGELWPH LAAYVLPQAI RETGLLLAGV
GILVIGLGTG TAWLVSAFAF PGRRLLDAAL LLPLAVPTYV VAYAYLDLMH PLGPVQSGLR
GLLGLSSPRD LSFPDLRSLP GCILLLGFVL YPYVYLPTRA LFLMRAGTLL EAARMLGAGP
ARTFFRVALP LARPAIALGT GLALMEALND VGAAEFLGVR TLTVQVYATW VNRSDLPGAA
QIALVMLAGV VGLVALERLA RGGRGYAGSG HRDRPTARRP LSGWRAGLAL GLGLTPVLLG
FGLPAGYLAW AVWQRLKGMG LPDTLAAQAL NTVLYAGAAT LVTVAVGLLV AASPHLLGRR
SGLALIRAAG LGYAMPGTVL AVGLLAPLAL LDTGLTNLAG AGLGWAPAVG LGTGAALVIA
YTLRFLTIPV GATEAGLARI PSTLPDAARM LGRGRFGTLL AVQLPLAWPA VLSGALLAFV
DMAKELPVTL LLRPLNVETL STHLYGEAAR GTYEDGAASA LLIVMTGLIP VALLLRLNRG
AGLRPSRSDA
|
|---|
| |