| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0169 |
|---|
| Symbol | |
|---|
| ID | 4179710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 207771 |
|---|
| End bp | 209471 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638066049 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_672739 |
|---|
| Protein GI | 110632531 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGCT ACACCTTCAG GGAACCGATC TCAGACCCCG ACGCGTTGGC GCGCGGGTGC
AGGCGGCCGC GCCATCCGGT GGCCCTCATC GCCGCGCTTG TCACGGCGGC AATCGTGCTC
CTGCCGATCC TCACGGTTGT CGCAGTGGCT TTATCCGGGG GAGGAGCGGA CTGGTCGCAC
CTGGGGCGGT ATGTTCTTCC GCAAGCTTCC ATTACCACAT CTGTGCTCCT TGCGCTCGTG
GCCTTGGGGA CCGGCTTCAT CGGTGTGGGC TGCGCATGGC TGGTGGTGGC CTACGACTTC
CCCTTGCGCC GCGTCCTTGC CTGGGCGCTT GTGCTTCCGC TCGCCGTTCC TCCCTATCTC
GCAGCCTATG CGTTCGCCGA GTTCTTCGAC TATGTCGGCC CGCTGCAGAG CATGATACGG
GCGATATTCG GTTTCCAAAG CCGCAGTGAA TACTGGTTTC CGGAAATCCG GTCCACGGGC
GGCGCCGCCC TGGTCATGAC CTCGGTGACC TTCCCTTATG TCTATCTTAC CGCGCGCGTC
ATTTTCCTCA TGCAGGGGCG AAACATCGCC GATGTGGCGC GCACGCTGGG TGCCGCTCCG
GCCCGCGTCT TCTGGCGCGT TCTCCTTCCC GTGGCACGGC CGGCAATCGC GGCCGGCATC
GCGCTTGTGC TCATGGAGAC GATCAACGAT ATCGGCGCGG TCGAGCATCT GGGAGTGCGC
ACCCTTACGC TTTCGGTCTA CTCGACCTGG CTCAACCGCG GCAGCCTCGT GGGCGCGGCG
CAGATCGCAC TGGTGATGCT ACTTCTCGTC ATCGCGCTGC TTGCAGCCGA ACGGATGGCG
CGAACCAACC AGCGCTTCCA TGCACCGCGC GCGACACAGA TGAAATCGCG ACCGTCGCGG
ATCCAGCTTC GCGGATGGCG CGCGCCGGTT GCGACCTTCC TCGGTCTTCT TCCCATCATA
TCGGGATTCG GAATCCCCTT CCTCGTATTT GGCCGATATG CGCTCAACCG GCTTGACCAG
CTGACGGACC CGAAGCTCGC CGAGGCGTTT CTCACCAGCC TTTTAACGGC CCTTGCAACG
GCGATCCTCA CCGTGGCCAT CTCGCTGATG CTGCTCTACG CGGCCAGGCT TGCCCGCTCG
CGGTCCATGG CGCTGCTCGT GCGTATCGCC AGCGTCGGCT ATGGATTGCC CGGAACTATT
CTGGCGCTGG GACTCCTGAT TTCCCTCGCC CGGTTCGACA ACTTGGTCGA TGCGCTGGCG
CGCGAATATG CGGGCTTTTC CACGGGCCTT ATCTTCACCG GGTCGGCGGC AGCCGTGGTG
CTTGCCTGCG CCATCCGTTT CCTGGCCCTC GCGGAAGGAG CCATACAGGC AGGTCTTGAG
AAACTGCCGT CACATCTCGA CGAAGCTGCA CGAAGCCTCG GTCGATCCGC AGCGTGGAGC
GCCCTGTCGG TGCTTCTGCC GCTCCTGAAA CCGGCCATCC TGACGGCCGG GATCCTCGTC
TTCGTGGATA CGGTGAAGGA GCTCTCGGCA ACGATCCTCC TTCGCCCCTT CGGCTTCAAC
ACGCTTGCCA CCTTCGTATA TGAGAACGCT TCGCGCGGCG TGGTCGAGGA TGGCGCAATG
GCTGCTCTTG TTATCATTGC GACTTCCATC GCACCGGTCA TCCTGCTCTC CGGCGCGCTA
ATGCGCGACC GCGAGGCATA A
|
|---|
| Protein sequence | MVSYTFREPI SDPDALARGC RRPRHPVALI AALVTAAIVL LPILTVVAVA LSGGGADWSH
LGRYVLPQAS ITTSVLLALV ALGTGFIGVG CAWLVVAYDF PLRRVLAWAL VLPLAVPPYL
AAYAFAEFFD YVGPLQSMIR AIFGFQSRSE YWFPEIRSTG GAALVMTSVT FPYVYLTARV
IFLMQGRNIA DVARTLGAAP ARVFWRVLLP VARPAIAAGI ALVLMETIND IGAVEHLGVR
TLTLSVYSTW LNRGSLVGAA QIALVMLLLV IALLAAERMA RTNQRFHAPR ATQMKSRPSR
IQLRGWRAPV ATFLGLLPII SGFGIPFLVF GRYALNRLDQ LTDPKLAEAF LTSLLTALAT
AILTVAISLM LLYAARLARS RSMALLVRIA SVGYGLPGTI LALGLLISLA RFDNLVDALA
REYAGFSTGL IFTGSAAAVV LACAIRFLAL AEGAIQAGLE KLPSHLDEAA RSLGRSAAWS
ALSVLLPLLK PAILTAGILV FVDTVKELSA TILLRPFGFN TLATFVYENA SRGVVEDGAM
AALVIIATSI APVILLSGAL MRDREA
|
|---|
| |