| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1149 |
|---|
| Symbol | |
|---|
| ID | 4011887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1191760 |
|---|
| End bp | 1193370 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637940826 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_547998 |
|---|
| Protein GI | 91787046 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.945562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCGCC GTTTCCTACC CTCCGCGCTT CTTTTTGCGC TGGTCAGCCT GCTGACCCTG
CCGGTGCTGG CCGTGGCTTT TTCCTGGCTG CAGTTCAACG ACGAAGCCAG GTCCATCCTG
GTCCAGATGC TGCAAACGGT CTTGCCTGCC TACACCGGCA CCTCGGTGCT GCTGTGCCTG
TGTGTGGCCT TCGGTGTCGC GGGGGTGGGC ATGGCCACCG CCAGCGCCGT CACGCTGTTC
GAATTTCCCG GCCGGCGCGT TTTTGAGTGG GCCCTGCTGC TTCCGCTGGC CATGCCGGCC
TACGTCGTCG CCTATGCCTA CACCGACTTC CTGCAATACG CGGGCCCGCT GCAGACCTGG
CTGCGTGCCG CCTTTGGCCT TCAGGGCCGC CTGCTGCCTG AGGTGCGCAG CCTGGGTGGC
GCCGTGCTGG TATTCACAGT CGCGTTGTAT CCCTACGTGT ATTTGCTGGC CCGTACCGCT
TTGTCAGAGC GGGCCGTGCA CCTGATGGAA GCGGCCCGCC TGCTCGGTGC GCCGCTTTCC
CGCCGTATCC GCGGTGTGGC CCTGCCTTTG GCGCGTCCCG CCGTGGCGGC CGGGGTGGCG
CTGGCTTTGA TGGAAACACT GGCTGATTTT GGCGTGTCCA GCTATTTCGG CATCCAGACC
TTCACCGCCG GCATTTACAA GGCCTGGCTG TCGATGGACA ACCGGATTGC GGCGGCGCAA
TTGGCCACGG TGCTGCTGGT GCTTGTGGCC ATGCTGCTGC GAATTGAACA CAGCGCGCAA
AAGCGCATGC GTTTTGCCGC AGGCCGGGGT GCGCGTGCGG GTGCCCAGGA CGCCGCACCC
GTGCGGCTGC GGGGCAGCCG CGCTGTCCTC GCGTGGCTGG TCTGCGCCCT GCCCATCGCG
CTGGGCTTTC TCTTGCCCGT GCTTTTCATG CTGCGCCCGC TGGTTCTGGG CTGGGACAGC
CTGCTGTGGG ACAAATTCCT GGGCTGGACG CTGAACAGTG TCTGGCTGGC CGGCCTGAGC
GCGCTGCTGG CCACCGCGCT GGCTGTCGGC CTGGCGTTCG CCGTGCGTCG CCAGCCGCAT
GTGCTTACCC GCTCGGCTGT TCACCTGGCC GGCCTGGGCT ATGCCGTTCC GGGTGCGGTG
ATTGTGGTCG GCCTGCTGTT GCCCGTGGGC TGGCTGCAGG CGGCAGCGCC CCAAACCGCT
GCGGGCTACT GGGTCACGGC CACGGTGCTC GGCGTCGTTT GGGCCTACCT GGTTCGCTTC
ACTGCGGTCG CGCTGCAGAC CATGCAAAGC GGCTATTCAC GCATTCCCGC CAGCTTTGAT
GACAGCGCGC GCATGCTGGG TACGACCGGC ACCGGCATTC TTGCGCGCGT GCACTGGCCG
CTGCTCAAGC GCTCCGTGGC GGCTGCCGGC TTGCTGGTGT TCGTCGATGT CATGAAGGAG
CTGCCCGCCA CGCTGGTGCT GCGCCCTTTC AACAGCGACA CGCTGGCCGT CGTGACCTAC
CAGCTGGCAC GGGACGAGCG GCTTGGGGAA GCCGCCTTGC CGGCGCTGGC ACTGGTGCTG
GTGGGGCTGC TGCCGGTGGC CTTGCTGAGC CGCACCCTGC GCTCAAGGTA G
|
|---|
| Protein sequence | MLRRFLPSAL LFALVSLLTL PVLAVAFSWL QFNDEARSIL VQMLQTVLPA YTGTSVLLCL
CVAFGVAGVG MATASAVTLF EFPGRRVFEW ALLLPLAMPA YVVAYAYTDF LQYAGPLQTW
LRAAFGLQGR LLPEVRSLGG AVLVFTVALY PYVYLLARTA LSERAVHLME AARLLGAPLS
RRIRGVALPL ARPAVAAGVA LALMETLADF GVSSYFGIQT FTAGIYKAWL SMDNRIAAAQ
LATVLLVLVA MLLRIEHSAQ KRMRFAAGRG ARAGAQDAAP VRLRGSRAVL AWLVCALPIA
LGFLLPVLFM LRPLVLGWDS LLWDKFLGWT LNSVWLAGLS ALLATALAVG LAFAVRRQPH
VLTRSAVHLA GLGYAVPGAV IVVGLLLPVG WLQAAAPQTA AGYWVTATVL GVVWAYLVRF
TAVALQTMQS GYSRIPASFD DSARMLGTTG TGILARVHWP LLKRSVAAAG LLVFVDVMKE
LPATLVLRPF NSDTLAVVTY QLARDERLGE AALPALALVL VGLLPVALLS RTLRSR
|
|---|
| |